Oncorhynchus kisutch (coho salmon): 109875776
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Entry
109875776 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V-like
KO
K06487
integrin alpha V
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04081
Hormone signaling
oki04145
Phagocytosis
oki04148
Efferocytosis
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecule (CAM) interaction
oki04518
Integrin signaling
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109875776
04512 ECM-receptor interaction
109875776
04514 Cell adhesion molecule (CAM) interaction
109875776
04518 Integrin signaling
109875776
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109875776
04148 Efferocytosis
109875776
09144 Cellular community - eukaryotes
04510 Focal adhesion
109875776
09142 Cell motility
04820 Cytoskeleton in muscle cells
109875776
04810 Regulation of actin cytoskeleton
109875776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875776
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109875776
04515 Cell adhesion molecules [BR:
oki04515
]
109875776
04090 CD molecules [BR:
oki04090
]
109875776
Membrane trafficking [BR:
oki04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109875776
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109875776
Exosomal proteins of epithelial cells
109875776
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109875776
CD molecules [BR:
oki04090
]
Proteins
109875776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
109875776
NCBI-ProteinID:
XP_031661267
Ensembl:
ENSOKIG00005040059
LinkDB
All DBs
Position
LG26:47063174..47150093
Genome browser
AA seq
1046 aa
AA seq
DB search
MEPLRKLCISLALILPCLQWTTCFNLDIDKPYVFSGPEGSYFGFSVDFFQPDAKQSNILI
GAPKANTSSASTVVERGAVYTCPWQKSSDCTQVQFDNTDDRKNNEGLQMEFKSNQWFGAT
VRSHGEHILACAPLYQWSTYSVSEREPVGTCFLKKGQEVVEYSPCRSKANSPEGQGFCQA
GFSIDFVKNNRVVVGGPGSFYWQGQLISDDISEIITRFNRQYYTPYSNQLTTKSASAQYD
DSYLGYSVTVGDFNADGEDDYITGVPRGDKALGYVNIFNGRNMQSVLNFTGTQMAAYFGH
SVAATDINNDGLVDLFVGAPLFMDRGSDGKLREVGQVSVFLGKGGFSFHTPITLSGTEIY
SRFGSSIATLGDLDMDGFNDIAIAAPYGGQKHRGLVYIHNGRAAGPDPVPSQVLEGRWAS
SYMPPXFGYSLHGATDIDQNGYPDLIVGVFGADKAVLYRARPVISVNASLDISPQILNPE
ERSCKLPDSDTKVSCFKVKYCLKASGRGAPDSLNFQVHLVLDRLKHKGATKRVLFLHSKT
SQYTKNMTVSNGQGPACEEQEAFLIDDSEFRDKITPISVFMEFSLDYQQAADKTGLLPIL
EQTTTTNISKQAHVLLDCGDDNICKPDLKLSVVSDQKQIYIGDDNPLTLEVTAENRGEGA
YEAELHVFLPPQADFTGVVRNSETLSRLSCAYKTENQTRVVVCDLGNPMKGGIKVLAGLR
FSVHQLSEQDTFVKFDLQIQSSNQFNSTSSLVSSITTLAVLANVDIRGVALPDQVFLPIA
NWKPKENPVVGDDIGPQILHIYELRNRGPSTFSKAILDIEWPYRFNNGSLLYITKLEVDG
GMNCSTDMEINPLNVSNPLSAETNGSASTSGDNTEGRNRNHVHRRELAKKEMEGDLETLD
CSKAQCLKIRCQVGRVERGQSTTLYVYSRLGVATFLKTESQNRSFTVRSSASFSVIEMPY
NKNLVSELPSNAITVSMSVIWLKSDPEPVPGWVVALAVLAGLLLLALLIFIMYKLGFFKR
VRPPQEDNTEKEQLAPQENGDRNNEA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacttcgaaaactttgtatatctttggctttgatcctgccttgtttacaatgg
acaacttgtttcaatctggacattgacaaaccctatgtattctctggtcctgaaggaagt
tattttggattttctgtggatttcttccagccagatgccaagcagtcaaacattcttata
ggagctcccaaagccaacacctcctcagcttctacagtggtggagcgaggggcagtctat
acctgcccatggcagaagagtagtgactgtacccaagtacagtttgacaatactgatgat
cgtaagaataacgaggggctccagatggaatttaagtccaaccagtggtttggtgccacg
gtacggtcacatggtgaacacatcctggcctgtgctcctctctaccagtggagcacgtac
agcgtgtcagagagagagcctgttggaacgtgtttcctgaagaaaggacaggaagttgtg
gagtactctccttgtcgatctaaagccaactctccagagggacaaggcttctgtcaggct
ggattcagtattgactttgtcaagaataacagggtggttgttggaggccctggtagtttc
tactggcaaggtcagctgataagtgatgatatctctgagatcatcaccaggttcaataga
caatactacactccttacagtaaccagctgaccactaagtctgccagcgctcagtacgat
gacagctatttaggttattctgtgactgtcggtgacttcaatgctgatggagaagatgat
tacattaccggggtacccaggggagacaaagctctaggctatgtgaacatcttcaatggg
aggaatatgcagtctgtcctgaacttcacaggaacacagatggctgcctacttcggccat
tctgtggcagcgaccgacatcaataacgatgggctggtggatctgtttgtaggggcccct
ctgttcatggaccgtggtagtgatgggaagctgagggaggtgggtcaggtgtctgtgttc
ctggggaaaggaggcttctccttccacacacccatcacactgagtgggacagagatctac
tcacgcttcggcagttctatcgccacactgggggacctggatatggatggcttcaacgac
attgccatagctgcaccctacggcgggcagaagcacaggggcctagtgtacatccacaat
gggagggctgcagggcctgacccagtgccttctcaggtcctagaggggaggtgggcctcc
tcttacatgcccccangctttggatactccctgcacggagccaccgatattgaccagaat
ggatacccagacttaatagtgggtgtatttggtgcagacaaagcagttctatacagggcc
cggcccgtcatcagtgttaacgcctccctggacatcagccctcagatcctcaacccagag
gaaaggagctgcaagctgcctgacagtgacactaaagtgtcctgtttcaaagtgaagtac
tgtcttaaagcgagtggaagaggtgcaccagattcactgaacttccaggttcaccttgtc
ctggatagactcaaacacaagggggcgacaaagagagttctgttcctccacagcaaaact
tcccagtacacaaaaaacatgacggtcagcaacggccaaggaccagcctgcgaggagcaa
gaagccttcctcatagatgactctgagttccgggacaagatcactcccatctctgtgttc
atggagtttagtctggactaccagcaggcagcagataagaccggcctactgcctatcctg
gagcagactaccaccaccaacatctccaaacaggcccatgtcctactggactgtggagat
gacaacatctgcaagccagacctcaagctgtctgtagtgagtgaccagaagcagatctac
ataggagatgataaccccttgaccctggaggtgacagcggagaacagaggagagggggcg
tacgaggcagagctacatgtcttccttcctccccaggctgacttcactggggtcgtacgc
aacagtgagactctgtctagattgtcctgtgcatacaagacagagaaccagaccagggtg
gtggtgtgtgacctggggaaccccatgaaaggaggaattaaggtgctggccggactccgc
ttcagtgttcatcagctctcagagcaggacacgtttgtgaagtttgacctgcagatacag
agttccaaccagttcaacagcaccagcagtctggtctccagcatcacaacgctggctgtt
ctggccaatgtggatatcagaggggtggcgcttcctgaccaggtcttcctgcccatcgct
aactggaagcccaaagagaaccctgtcgtaggggacgacatcggtccacaaatactgcac
atctatgagttgcgtaacagaggtcccagtaccttcagcaaggccatactggacatcgag
tggccctacaggttcaacaacggctctctgctctacatcactaaactagaggtggacgga
ggcatgaactgcagtacagacatggagatcaacccactcaatgtctcaaatcctttgtca
gcagagacaaatggttcagcttccaccagtggagacaatacagaagggaggaacaggaac
catgttcaccgcagagagctggcgaagaaagagatggagggagacctggaaactctggac
tgttccaaggcccagtgcctgaagatccggtgtcaggtgggccgtgtggagagaggtcag
agtactaccctgtacgtctactccagactgggggtggccaccttcctcaagactgagagc
cagaaccgatcgttcaccgtgagatcctccgcttccttcagcgtcatagagatgccttat
aacaagaacctggtgtctgagctgccgtccaacgcaattacggtgagtatgtcagtgatc
tggttgaaatctgatcctgaacctgttcccgggtgggtggtggcgctggctgtgctggct
ggactactgctgctggctctgctaatcttcatcatgtataagctggggttcttcaagcgt
gtacgcccccctcaggaggacaacacggagaaggaacagctggcaccgcaggagaacggt
gacaggaacaatgaagcctga
DBGET
integrated database retrieval system
