Oncorhynchus kisutch (coho salmon): 109875836
Help
Entry
109875836 CDS
T09179
Name
(RefSeq) semaphorin-6D isoform X2
KO
K06842
semaphorin 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
109875836
NCBI-ProteinID:
XP_020323844
Ensembl:
ENSOKIG00005011434
LinkDB
All DBs
Position
LG14:complement(56999684..57130942)
Genome browser
AA seq
1098 aa
AA seq
DB search
MVPPERTRWRLLLAALTLTSCLLSTSATAPPFPKDLEPINVVRWEHSYLYPGFQGLVSDN
DTFRLGLDFQRMLRINHMLYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGR
NSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVVGQARCPFESGQS
NLGLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNY
VYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFF
YFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDS
AWTPVPEEQVPKPRPGSCAGDGLASAYKSSTTFPDDTLTFIKSYPLMDEAVPSVNDRPCF
TRTTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSSGSTIGANCVFHFSRYKL
TQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNPSMCNIQG
QEDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSTRDPYCIWLRTGSC
ANMAPGFKAGFEQDIEGDHSLYPENCLDVLATKRNQNPAADSAYGVRRLPDMEKSSPSVH
YTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASLHPALSLRSLAKLNGL
LDGQPKEEKLDVSTPKMYSSFVPNGKEHTPGRHGMSLGDPDLNLSQGENLSGLPTPDSTP
ELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFGLGSSRSSSGVTQQVFPFSHSLTNGQ
ALGHLPEERKIPNDERAKGASASQSSSCYPQTVVDVAALDELLKHIHEVSASGSHSITVL
TSPCAPLPGSSSSSHNHSHSQSSFRSQPQIPETESAQYYSSSTLPRDSLTRRLDVPPDAA
AASSAGATPLQQQSIPERSSVTRHHSQRHLMIKMGNGGAVPRQHSFRQGGVGPPPHQLLT
RINSGGGGAGGGGGVGFEAHRPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPK
PLFLPATSPVNEQGNYNY
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccggaacggacgaggtggcgcctcctgctggcagccctcacactcacttcc
tgtctactgtccacctcagccacagccccgcccttcccaaaagacctggagccaatcaac
gttgtccgatgggagcactcctacctgtacccagggttccaggggctggtgtcggacaac
gacacattcagactaggcctggacttccagaggatgctgaggatcaaccatatgctctac
atcgctgccagggaccatgtttttgcagtaaacttgaccacagctggtgacgacttcgtc
ccccagctgaagctgacatggaggtccaaggatgtggccaagtgtaccgtgaggggtcga
aacagcgatgaatgctacaactatgtcaaagtgctggtaccgaggaacgacgagacccta
tttgcttgcggcactaatgccttcaaccccacctgccgtaactacaagatgaccaccctg
gagcaggttggcgaagaggtggtgggtcaggcgcgctgtcccttcgagtcggggcaatcc
aacctcggcctctttgctggcggtgatttctactctgccaccatgaccgacttcctggcc
agcgacgctgtcatctatcgtagtcttggcgacgacagccccgtcctgcggaccgtcaag
tacgactccaagtggctccgagagccccatttccaccatgcgatcgagtatggaaattat
gtctactttttcctcagtgagattgcagtggagtacaccacactgggcaaggtggtgttc
tctcgtgtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctagagcgc
tactggacctccttcctgaaggcgcggctcaactgctcggtgcccggcgactcgttcttt
tacttcgacgtgctgcagtcgctcaccaacgtgctacagatcaaccagcgccccgcggtg
gtgggagtgtttactacgcaagctaacagtatccctggctcagcagtgtgtgccttctac
atggatgacatagagaaggcctttaatgggaagtttaaggaacagaaaaccagtgactca
gcctggaccccagtaccagaggaacaggtgcccaagcctagacctggttcctgtgccggt
gacggcctggcctctgcctacaagtcgtccaccaccttccccgacgacacgctgaccttc
atcaagtcttaccctctgatggacgaggcggtgccctccgtcaacgaccggccctgcttc
acccgcaccaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccg
tctaaagaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttg
tccagttccggaagtacaatcggcgctaactgtgtttttcacttctccaggtacaagctg
actcagattgcggtggacacctctgccgggccgtctaaagaccgcactgtggtcttcctg
ggctcggaggatggcagggtcctgaaggtgttgtccagcactcatcctaatgcctccttt
ggctcccagctcctggaggacatagatgtgtataacccctcaatgtgtaacattcagggg
caggaggaccggaggattctgggaatggagctggataaggagcatcatgccttgttcgtg
gccttcaccagctgtgtcatcagagtaccactcagccgctgcactgagcacggcgcctgt
aaaaagagttgtctgtccacccgcgacccgtactgcatctggctccggaccgggagttgt
gccaacatggcgccagggttcaaggctggctttgagcaggatatcgagggagaccactca
ctgtaccctgagaactgccttgatgttctggcgaccaagcgaaaccagaaccccgcggca
gactcagcctacggtgtccgaaggctccctgacatggagaagtccagccccagcgtccac
tacaccctcctgatcgcctgcgtcctggttgcctttttcctcggtgccatcctctccggc
ttcctggtgtcatgctactgcagtcacaacgcccgccgtgcccaccggcttggcaaggac
cctgaggcatccctccaccccgccctctcgctgcgcagcctggccaagctaaatggcctg
ctggacggccagccgaaagaggagaagctggacgtgtctacgcccaagatgtacagctcc
ttcgttcccaacgggaaggagcacactccgggcaggcacgggatgtccctgggagaccct
gaccttaacctctcccagggggagaacctctcaggcctacccacccctgactccaccccg
gagctgccgatcaagaacatgaaggccttccggaaccagtgggagaggaaccagaactgc
aacaacgcaaaggagtctaaggcaccgcctggcaccggtttcggcctgggttcgtcgagg
tccagctcgggggtcacccagcaggtgttccccttctcccacagcctgaccaacggccaa
gccctcgggcacctgcccgaggagaggaagatccccaacgacgagcgtgcaaagggggct
tcggcctcccagtcctcctcctgctacccgcagacggtggtggatgtggcggccctggac
gagctcctcaagcacatccacgaggtcagcgcttcaggcagccacagcatcactgtgctg
acctcaccgtgtgctcccctgccgggtagctccagctccagccataaccacagtcacagc
cagagcagcttcagatcccagccccagatccccgagacggagtcggcccagtactacagc
tcctccaccctgcccagggacagtctgacccgccgcctggacgtgccccccgatgctgct
gccgcctcctcagctggcgccaccccgctgcagcagcagtccatccccgagcggagctca
gtgactcgccaccactcccagaggcatttaatgatcaagatgggcaacggaggggccgtc
ccgcgccagcacagcttcagacagggcggggttgggccaccaccccaccagctgctcacc
cggatcaactctggaggtggtggtgctggcggcgggggtggggttggctttgaagcccac
cggccactcatccctagtgcctgcctgacacggcagcacagctacagcgaaccaccccac
ctccaccgcgccgccattgtacgccgcacggcctccctcaagccccaggtaccccccaag
cccctcttcctgcccgccacttcgcccgtaaacgagcaaggcaattacaactactga
DBGET
integrated database retrieval system