Oncorhynchus kisutch (coho salmon): 109875891
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Entry
109875891 CDS
T09179
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109875891
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109875891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
109875891
NCBI-ProteinID:
XP_031692277
Ensembl:
ENSOKIG00005005836
LinkDB
All DBs
Position
LG11:83446278..83465602
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AA seq
527 aa
AA seq
DB search
MDGMGDVAVGVKRGSDELMSTSVYNSGSDMSSIGDVTANGSDSKSNGSDSKKLRVEDRME
APPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMINYY
STVTPHVRNVPVFIQYSNHKELKTDSGNQRAQAVLQAVSAVQGGGTPASGSIVDLTAASS
PVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPPTAQQAKIAL
DGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPSMAAAFQGKD
SNSLLGGLSPLNAAAAAAAAAGRVALSGHSGASGVLLASNLNEEMVTPQSLFTLFGVYGD
AQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGKPIRVALSKHTSVQLPRDGLDD
QGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIPTDVSEEDLRLLFSNAGGTVNA
FKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatgggagatgttgcagttggtgtgaagagaggatcagatgagctgatgtca
accagtgtctacaacagtggatctgacatgagcagtatcggtgatgtcacagccaatggg
agcgacagtaaatccaatgggagcgacagtaaaaagctgagagtggaagaccggatggag
gctcctccctctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcggag
gtcattgccctggggttacctttcgggaaggtcacaaatatcctgacgcttaaggggaaa
aaccaggctttcttggagctgggcacagaggaagcagcgataaccatgatcaactactac
tctactgtgacaccgcatgttcggaacgtccccgtattcattcagtattccaaccacaaa
gaactcaaaacagatagtggaaaccagcgtgcccaggcggtcctgcaggcggtgtcagcg
gtccaaggaggaggtactcctgcgtctggctccattgtagatctaaccgctgcgtccagc
cctgtgctcagaataatcatcgacaacatgttctacccggtcactctggatgtgctgcag
cagatcttctcaaagttcggaacagtcatgaagatcatcacattcaccaagaacaaccag
ttccaggctctgctgcagttcaacgacccacccaccgcccagcaagccaaaatagccctg
gatggtcagaacatctacaactcatgctgtacgctccgcatcgactactccaagctggtc
aacctgaacgtgaagtacaacaacgacaagagccgtgactacacccggccagagctccct
gcaggggacggacagcctgccatggatcccagcatggctgctgccttccaaggcaaggac
tccaactctctgctcggtggcctgagcccgctgaatgctgccgcggcggcggctgctgct
gcagggagggtagctctgtccggtcactctggcgccagtggcgtgctcctggcctccaat
cttaacgaagagatggttacgccccaaagtctgtttactctcttcggggtgtatggtgat
gcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggctgat
gccaaccaagcccagctagctatgagtcacctgaatgggcagaagatgcatgggaaacca
atcagggtggctctgtctaagcacacctcggtgcagctgcccagggatggactggatgac
cagggcctcaccaaagacttcactaactcgcccctgcaccgcttcaagaagcctggttcc
aagaacttccagaatattttccctcccaccactactcttcacctctccaacatcccaacg
gacgtttccgaggaagacctccgactgctgttctccaacgccggggggaccgtgaacgca
ttcaagttctttcaggatcacaaaatggcgctgctccagatgtcaacggtggaggaggcc
atccagggtctgatcgacctccacaactacaacatgggtgacaaccatcacctgagagtc
tccttctccaaatccaccatctaa
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