Oncorhynchus kisutch (coho salmon): 109876442
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Entry
109876442 CDS
T09179
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109876442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109876442
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109876442
REST complex
109876442
Heterochromatin formation proteins
Other heterochromatin formation proteins
109876442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
109876442
NCBI-ProteinID:
XP_031668562
Ensembl:
ENSOKIG00005048053
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MKRRVEDQEPVFASQQQRRPPVPGTAEGFQHRVLAPAVYEAVTDNMQPSPGIQYSIPQGY
QVPTMPQNSSGHGHASSPAALVGPHPHSPAVQSQGAAMVQSHAHPLAPMAPSQGAQFQRL
KVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMG
FNTFLPPGYKIEVQTNEQVNVTTPGQIHYITPHGISVQNLPVTGPPSQPVPHHHQALQLP
SGPPTSTATASTALPTQPTPAKTSKPMQSPALTPTSQPNPSIPSYASPRSPSVQSHAPVS
STPSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGG
NYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVSCPPFLQLLSKTTADRAESV
RNDHGTTVKRPLMNNKQRLNQNGCPIRRHSGAGATPPVKKKPKMLGKDHAMAEASKHSIG
TESLFFEKVRKALRSSEAYDNFLRCLLIFNQEVISRAELVQLVLPFLGKFPELFSWFKNF
LGYRESSHIESFPKERTTEGMAMEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVL
NDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRALEAVQRRLS
RMTAEEQVKFRLDNTMGGCSEVIHRKAIQRIYGDKAADIIDGLKRNPAVSVPIVLKRLKM
KEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIETIYDERQ
EQASEDTAPVPGGPHMTLTYQDSQILEDAASLIIHHVKRQVGIQKEDKYKIKQVIHHFIP
DMLFARRGELSDVEEEEDEEEEEEEDETGPDEDGSKKHNGLAGSGGSAKSKLLFGNTGAQ
KLRGLDDVYNLYYVNNNWYIFQRLHQILCLRLLRIYGQAERQIEEDCREREWEREVLGVK
RDKSENPAVQLRLKEPMDIEVEDYYSAFLEMVRNLLDGNMEPTQYEDSLREMFTIHAYTA
FTMDKLIQSIVRQLQHIVSDELCVRVTDLYLSQSTNKATGGALSTQASRATAEGAYQRKA
EQLMSDENCFKLMFVKSQGSVTLTLELLDTEEENSDEPAETERWCDYVGRYLNSDSASPE
LREHLAQKPVFLPRNLRRIRKCQRGWEQLQQAKAATGTSEKSHSAEDLKMECMFKLNSYK
MVYVFKSEDYMYRRTALTRAHQSHQRVHTRLHRRFQGLVDTWAKEHVTSDMATDTRKWLM
GERREGLLPCTTTRDPQVLYYLKINRYHVTYHGSSSGAP
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtgtggaggatcaggaaccagtatttgcgtcccagcagcagcgtcgcccc
ccagtcccgggtactgcggagggcttccagcaccgcgtcctagccccagccgtgtacgag
gccgtcaccgacaacatgcagccttcccccggcatccaatactccatcccccagggttac
caggttcccacaatgccccagaactccagtggccatggacatgcctctagtcccgctgca
cttgtcgggccccacccccacagtccagctgtccaatcacagggggctgcgatggtccag
agccatgcccaccctttggcccctatggccccctcacagggtgcccagttccagcgactc
aaggttgaagatgctctgtcctacttggaccaagtgaaactgcagtttgggaatcagcct
caagtctacaacgacttccttgacatcatgaaagagttcaagtcacagagcatcgacact
ccaggtgtgatcagccgtgtctcccagctcttcaagggccacccagacctcatcatggga
ttcaacaccttcctgccgccgggctacaagattgaggtccagaccaacgagcaggtcaac
gtgaccacgccaggacagatccactacatcaccccgcacggcatctctgtccagaacctc
cccgttacggggccacccagccagccggtgccccatcatcaccaggccctgcagctgccc
agtggaccccccaccagcaccgccacagccagcaccgctctacccacacagcctacaccg
gccaagaccagcaagccgatgcagtctcctgccctgaccccgactagccaacccaaccca
tcaatcccatcctacgcctccccacggtccccctcggtccagtcccacgccccggtgagc
agcaccccttccagcgggcctcccctgcagaacaaccagcccgtggagttcaaccacgcc
attaactacgttaacaagatcaagaaccgcttccaggggcagcccgacatctacaaagcc
ttcttggagatcctgcacacttaccagaaggagcagcgaaatgcgaaggaggctgggggg
aactacactccggcattaacagagcaggaggtgtacgctcaggtggcacggctcttcaag
aaccaggaggacctgctctcggagttcggacagttcttaccggacgccaacagttcagtg
agttgtcccccttttctccagctgctgagcaagaccacggccgaccgggcggagtcggtg
cgcaacgaccacggcaccacggtcaagaggcccttgatgaacaacaagcagcgtctcaac
cagaacggctgtccaatccggaggcattctggagcgggcgccacgcctcccgtcaagaag
aaacccaagatgttggggaaagaccatgccatggctgaggccagcaaacacagcatcggc
acagaatctctcttctttgaaaaggtgaggaaagccctccggagctctgaggcctatgac
aacttcctgcggtgtctgctcatctttaaccaggaagtgatttctcgtgcagagcttgtg
cagctagtgctgccattcctgggaaaattcccagagctgttttcctggttcaaaaacttc
ctgggctacagagagtccagccacatcgagagctttcccaaggagaggaccacagagggc
atggccatggagattgactacgcttcctgtaagaggttgggctccagctacagggcgcta
cccaagagctacacacagcccaagtgtacagggaggaccccactgtgtaaagaggtcctg
aatgacacgtgggtgtcgttcccttcgtggtcagaggattccacctttgtcagctccaag
aagacccagtatgaggagcatatttacagatgtgaggacgagcgcttcgagctggacgtg
gtgctggagaccaacctggccaccataagagctctggaggccgtacagaggaggctgtcg
cgcatgacggccgaggaacaggtcaagttccggctggacaacaccatgggcggctgctct
gaggtcatccaccgcaaggccatccagaggatatacggcgacaaggccgccgacatcatc
gacgggctcaagaggaacccggctgtgtccgtccctatagtactcaagaggttaaagatg
aaagaagaagaatggagggaagcccagagaggattcaacaagatctggagggagcagaat
gagaagtattacctcaagtccctcgaccaccaaggcatcaacttcaagcagaatgacacc
aaggtgttccgctcaaagaccttgctcaatgagattgagaccatatacgatgagcgacag
gaacaggcttccgaggacacggcccccgtgcctggcgggccccacatgaccctgacctac
caggacagccagatcctggaggacgccgcctcgctcatcatccaccacgtcaagaggcag
gtcggcatccagaaggaggacaagtacaagatcaaacaggtcatccaccactttatccca
gacatgctgttcgcccggcgcggggagctgtcggatgtggaggaagaggaagacgaggag
gaggaggaggaagaagacgaaaccgggccagatgaagacgggtcaaagaagcacaacggg
ttggctggcagtggtggctccgctaagtctaagctgctattcggcaacacgggggcacag
aaactgcgtggcctagacgacgtctacaacctctactacgtcaacaacaactggtacatc
ttccagcgcctgcatcagatcctctgtttgcggttgttgcgcatctacgggcaggcagag
aggcagatcgaggaggactgcagggaacgggagtgggagagggaggtgctgggtgtcaaa
cgggataagagtgagaatcctgccgtccagctgagactaaaggagcccatggacattgaa
gtggaggactactactctgccttcctggagatggtgcggaacctcctggacggtaacatg
gagcccacccagtacgaggactccctcagggagatgttcaccatccacgcctacactgcc
ttcaccatggacaagctcatccagagcattgtcagacagctccagcacattgtgagtgat
gagctctgcgtgcgcgtgacagacctctacctgagccagagcaccaacaaggccaccggc
ggcgccctgtccacccaggcctccagagcgaccgccgagggggcataccagcgcaaggcg
gagcagctcatgtccgacgagaactgcttcaagctgatgtttgtgaagagccaaggcagc
gtgaccctgaccctagagctgcttgacacggaggaggagaactcagacgaacccgctgag
acagagcggtggtgcgactacgtgggacgctacctgaactcggactcagcgtctccagag
ctgcgcgagcacctggcccaaaagcctgtgttcctccccaggaacctccggcggatccgg
aagtgccagagagggtgggagcagctgcagcaggcgaaggcggctacggggacatcggag
aagtcccacagcgctgaggacctgaagatggagtgcatgttcaaactcaactcgtacaag
atggtgtacgtcttcaagtcggaggactacatgtacagacgcactgcgttgacccgggct
caccagtcccaccagagagtccacactcgcctgcaccgccgcttccaaggcttggtggac
acctgggccaaggaacacgtgaccagcgacatggccaccgacacccgcaagtggctgatg
ggagagcgtcgcgagggtctgttgccgtgcaccaccacccgggatccccaggtcctctat
tacctgaaaatcaacagataccatgtgacgtatcatggcagctcgtcaggggcaccttag
DBGET
integrated database retrieval system
