Oncorhynchus kisutch (coho salmon): 109876525
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Entry
109876525 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109876525
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109876525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109876525
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109876525
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109876525
NCBI-ProteinID:
XP_020324521
LinkDB
All DBs
Position
LG14:80642720..80650993
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AA seq
393 aa
AA seq
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MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGGGRSGGGYGRGGRDRYGPPARTDYRL
IVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVN
GRKIRLIEDRPGAKRSKRSYSRSRSRSRSRSRSRRSRKSRSDSSSRSRSRGAGSRSRSRS
HSKKDKTKGSRDEERTNGAHKAKEGRGARSKSRSRSRSKSKKSSKKEGKKSRKDESRSRS
RSRSAAKDRSRKSGSKSREPAKSDDEGAAAEKGAARSRSRSHTPAESKPKSKSKSPSPSP
AKARSRSPSVSRSESHSKSRSASRSRSRSLSES
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacattggaagattgagctatcgagcaagagaaaaggacgtggagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctatggc
tccggaggaggcggaggaggaggaggaggtggcggcggaggaggtggaagaagcgggggt
gggtacgggcgtggtggcagagaccgatatggcccaccggcaaggacagactatcggctg
atcgtcgagaacctgtccagtcgctgcagctggcaggacctgaaggactacatgaggcag
gcgggtgaggtgacgtatgctgacaccaataaggggcgcaggaacgagggtgtgatagag
ttcaggctgtactctgacatgaagagagccctggagaagctggatggcaccgaggtgaac
ggcaggaagatccggctgattgaggaccgccccggggccaaacggagcaagcgctcctac
tcgcgcagtcgcagccgctcccggtctcgctccaggagccgtaggtcccgtaagagccgc
agtgacagcagcagtcgctcccgctccaggggtgctggctcccgctcccgtagccgatcc
cacagcaagaaggacaagaccaagggcagcagagatgaggagcgcaccaacggtgcccac
aaggccaaggaggggcgcggggcccgcagcaagagccgcagtaggagccgcagcaagagc
aaaaagagcagcaagaaagaagggaagaagagcaggaaggatgagtccagatccagatcc
cgctccagatcagcagctaaggatcgctcccggaagtcgggttcaaagagccgcgagcca
gccaagagcgatgacgagggagctgcagctgagaagggggccgcccgttcccgctctcgc
tcccacacccctgccgaatccaaacccaagtcaaagtccaaatctccatctccctccccg
gccaaagcccgctcccgttccccctccgtctcccgctcagagtcccactccaaatctcgc
tccgcgtctcgttctcgctcccgctctctatcagagtcctga
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