Oncorhynchus kisutch (coho salmon): 109876660
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Entry
109876660 CDS
T09179
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
oki04520
Adherens junction
oki04916
Melanogenesis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109876660 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109876660 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109876660 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109876660 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109876660 (lef1)
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
109876660 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109876660
NCBI-ProteinID:
XP_031670727
Ensembl:
ENSOKIG00005027778
UniProt:
A0A8C7HX50
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDQEQIFAELSHSEEDEGDLADIKSSLVNESET
SPNSNHDGTRQSQISQDSYHEKHRDHHDDGKHLDMYNKGHQYSGYPGYIMMTNMNNDSYM
NNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDINPKQGQYH
SSCLSTGMQRHHSGPDMTNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIV
NPQVKHEPQHDNDLMHIFARKPQHQDQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAEC
TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRE
KIQEPAADPHRTPFDPSALTRVGFQNHHAGTGQRMKTAYI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactagcaggtggtggtggtggcggggaccctgagctttgtgccaccgacgaa
atgattccgttcaaggatgaaggagaccaagaacaaatattcgcagaactcagtcactca
gaggaagacgagggagacttggcagatatcaagtcatctttagtaaatgagtcagagacg
agtccaaacagcaatcatgatggaactagacaatcccaaatatcccaagactcatatcat
gaaaaacacagagaccatcacgacgatgggaaacacctagacatgtacaacaaaggtcac
caatactctggatacccaggttacatcatgatgactaatatgaacaacgactcctacatg
aacaacggctccctgtcgccgcccatgcccagaacgtccaataaggttccggtggtgcag
ccgtcgcatgcggtccatccgctcacccccctcatcacgtacagcgacgaacatttcgcc
cccggaccccactctggacaccacccccaggacatcaaccccaaacaaggacagtaccac
tcatcctgtctctctacaggcatgcagcggcatcactccgggccggacatgaccaacttc
taccccctctcccctggaggagtgggacagatcacgcccccactgggatggttctcccac
cacatggtcccgggtccccccggccctcacgccacagggatcccccacccggccatcgtc
aacccccaggtcaaacacgagccccagcacgacaacgacctgatgcacatttttgccagg
aagcctcagcaccaggatcagaggaaggagcaggagcccaagagaccccacatcaagaag
ccgctgaatgccttcatgctgtacatgaaggagatgagggccaacgtggtggcagagtgc
acgctcaaggagagcgccgccatcaaccagatcctgggacggaggtggcatgctttatcc
agagaagagcaagctaagtattacgaattagcccgcaaggaacggcagctccacatgcag
ctctacccaggctggtccgccagagataattatggaaagaagaagaagcggaagagggag
aagatacaggaaccggctgcagacccccatagaactccatttgacccctccgccctcact
agagtgggctttcagaaccaccatgcaggtacaggccagagaatgaaaacggcgtacatc
tga
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integrated database retrieval system
