Oncorhynchus kisutch (coho salmon): 109876755
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Entry
109876755 CDS
T09179
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03020
RNA polymerase
oki04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109876755
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109876755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109876755
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109876755
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109876755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
109876755
NCBI-ProteinID:
XP_031677027
Ensembl:
ENSOKIG00005043882
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRPCDTCGKNLADCLGHYGYLDLEMPCFHVGYFKATIGILQMICKTCSHIMLTKE
EKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTMCLNCSTLNGPVKKCGLLKILHEKYK
TTKKVVDTVVSDFLNSFDIAIEHNKEVEGLLNRAQENLSPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRSGPEVHPGANF
IQQRHTQMKRFLKYGNRDKMAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDERIKIALPHPAILKPMTLWTGKQI
FGLILKPSKACPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDKGTLGSGSK
KNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKAKQDLLDGG
YAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKTNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
VYGGDGLDPAAMEGKDEPLEFNRVLDNIRSVHTCSEQPALSKNELVLTAESIMKRSDFKC
CRDSFLEALTDTGSEKYMEEIKKFIKATSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
SQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISAHLDVDDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKDNLPKVVVQGIPEVSRAVIHIDEQTGKNKYKLLVEGDNLRSVMATHGVNGNRTTS
NNTYEVEKTIGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPTPPRRPLLFDSPDFHIPLVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcagtttagagagactgatgtggccaaaaaaataagccacatctgtttt
gggatgaagtcggctgaacagatgagacagcaggctcatatccaagtggtcagtaagaac
ctgtacagccaggacaccagccatactcctctaccatacggagtactggatcatcgcatg
ggcaccagtgagaaggatcgtccttgtgacacgtgtgggaagaacctggctgactgtctg
ggacactatgggtatctggacctggagatgccctgtttccatgtgggctatttcaaagcc
accattggaatcctacagatgatctgtaagacgtgttctcacatcatgctgaccaaagag
gagaaactacagtttatggatgtgttgaagaggccaggcctagcgtacctccagaaacga
ggaatgaagaagaagatatccgacaaatgccgcaaaaggacaatgtgtctcaattgctcc
acgttaaatggaccagtgaagaagtgtggcttgctgaagatcctccacgagaaatacaag
acaaccaagaaagtggtggacactgtagtatcagactttctcaactcattcgatatcgca
atagaacacaacaaagaagtggagggcttgcttaacagggctcaggagaacctgagtcct
ctagtggtgctgaacctcttcaggaggataccagcggaggacattcccctgctcctgatg
aaccctgaggcaggtaagcccgcagacctcatcctcacccgcctgctggtacctccgctc
tgcatccgcccctctgtcatctcagacctcaagtcaggtactaatgaggatgacctcacc
atgaagctcacagagatcatcttcctcaatgacgtcatcaagaagcaccgtatgtcaggg
gccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctctac
atcaacagtgagctctctggcatccccctcaacatggcccctaagaagtggaccagaggc
ttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaagaga
gtggatttctctgggagaacggtcatctctccggaccccaacctgcggattgatgaggtg
gctgtccctgtgcacgtagccaaaatcctgacctacccagagaaggtgaacaaggccaac
ttggagatgctgaggaagctggtgcggagcggtccagaggtccaccctggagccaacttc
atccagcaacgacacacgcagatgaagaggtttctgaagtacgggaaccgagacaagatg
gcccaggagctgaggtttggagacgtggtggagagacacatgatcgatggagacatcgtc
ctcttcaaccgacagccctctctacacaaactcagcatcatggctcatattgccaaagtg
aagcctcacagaacgttccggtttaacgagtgtgtgtgcacgccgtacaacgctgacttt
gacggggatgagatgaaccttcaccttccccagacagaggaggccaaggctgaagccctg
gtgctgatggggaccaaagccaacctggtgacccccaggaacggagagcctctgattgct
gctattcaagactttctgacaggagcctacctgttgaccctgaaggacacattcttcgat
aggtcgaaagcctgccagatagtggcctctatcctggtgggggtggatgagaggatcaag
atagctctcccacaccctgccatactcaagcccatgactctgtggacagggaagcagatc
tttggtctgatcctgaagcccagtaaggcctgtccagtcaaggccaacctgaggaccaag
gggaaacagtacagtgggaaaggagaggacctctgcagcaacgactccttcgtggtgatc
cagaacagtgagttgatgtgtggtaccatggataagggcacattgggctctggctccaag
aagaacatattctacatcctgctgagagactgggggcagctggaggcagccaacgccatg
tctcgtctggcccgcatcgcccctacatacctctccaaccggggtttctccatcggtatt
ggtgacgtgaccccaggccagggtctgctgaaggccaaacaggacctgctggatggaggc
tatgccaagtgtgacgagtacatcgaggccctgaagacgggcaaactgcagcagcaacca
ggctgcacggctgaggagacgctggaggccctcatcctgaaggagctgtctgttatcaga
gaccatgccggcagcgcctgcctcagagaactggacaagaccaacagtcctctgattatg
gctctgtgtggctccaaaggatccttcatcaacatctcccagatgatcgcctgcgtgggc
cagcaggctataagcggctctcgagtgcccgacggctttgagaaccgctcgctgccacac
tttgagaagcactctaaacttcctgcagctaaagggtttgtagctgacagcttttattca
ggcctgacgccgacggagttctttttccacactatggctggtcgagagggcttggtagac
accgctgttaaaacagcggagaccggatacatgcagaggcgtctggtgaagtcgttggag
gacctgtgttcccagtatgatctgacggtacggagctccactggtgacatcattcagttt
gtctacgggggggacggcctggacccggccgccatggaggggaaagatgaaccgttggag
ttcaacagagttctggacaacatccggtctgtccatacgtgttcagagcagccagccctt
agtaagaatgagttggtcctgacagcagagtccatcatgaagaggagtgacttcaagtgc
tgccgagacagcttcctcgaggccttgacagacacgggctcagagaagtatatggaggag
atcaaaaagttcatcaaggctacatctgagaaaatcaagaagaccagggacaaatacggc
atcaacgacaatggcaccactgagcccagagttctgtatcagttggaccgcatcactcca
agccagctagagaagtttctggagacctgcagggacaagtacatgagagctcagatggag
ccaggctcagcagtaggagccctgtgtgcccagagcattggggagcctggcacccagatg
accctgaaaaccttccactttgctggggtagcctccatgaacatcaccctgggggtccca
cgcatcaaggagatcatcaacgcctccaagaacatcagcacacctataatcagcgctcac
ttggatgtggacgacgacgcagacttcggccgtctggtgaaagggaggattgagaagacc
cttctgggagagatttcagagtacattgaagaggtgtttctgccagacgactgtttcatt
ctggtcaagctgtcactggagaggatcagactgctacggctagaggtgaatgcagagaca
gtccgctactctatctgcatgtctaagctgagagtgaagcctggagacatagctgtacac
ggggaggcagtggtctgtgtatctcccagggaaaacagcaagagctccatgtactacgtc
ctccagtctctaaaggataacctgcccaaggtggtggtacagggtatccctgaggtctcc
agagctgtcattcacatcgacgagcagaccggcaagaacaagtacaagctgctggttgag
ggagacaacctacgcagtgtcatggcaacccacggtgtcaacggcaacaggaccacctca
aacaacacctatgaggttgagaagacgattggtatcgaggctgctaggtccaccatcatc
aatgagatccagtacaccatggtgaaccacggcatgagcatcgacaggcgacacgtcatg
ctcctggctgacctcatgtcctataagggtgagatcctgggtatcacccggtttggcctg
gctaagatgaaggagagcgtgttgatgctggcgtcctttgagaaaactgccgaccatctc
tttgacgctgcgtactttggtcagaaggactcggtctgtggtgtatctgaatgcatcatc
atgggaatccccatgaacattggtacaggactgttcaagctcttacacaaggctgataag
gaccccacgccacccaggagacccctgctcttcgacagtcccgacttccacatccccttg
gttacatag
DBGET
integrated database retrieval system
