Oncorhynchus kisutch (coho salmon): 109876820
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Entry
109876820 CDS
T09179
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109876820 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109876820 (efl1)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
GTPases
109876820 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
PDF2_C
EFG_IV
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
109876820
NCBI-ProteinID:
XP_031668362
Ensembl:
ENSOKIG00005039786
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYASGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDIEPAECPGLEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSQRMGIRAEVLLKTLWGDFYLNAKAKKIMKGAHAKGKKPL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDSRHSDPKVLLSAICSQWLPV
SQAVLFMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFMVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAAIQQTESGEGNGQSGST
TPATTPGGDNTIGSEGVSGQIQGLPLKAKPEEEEEKETFVAFARVYSGVVRRGQKVFVMG
PKYDPAQGLRMLPEGSTSVSACLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIG
GLEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPC
AEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVIRPPKVDMVN
EDLGKQQKVAVIHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEGSAD
LIRTLEQAGQAQREGRTLDMSTWTLDALMVLKSRLEVLLQGRKWRNAVDRIWAFGPRRYG
PNILLNSVEGYQRPSVWHCLEREKGEKEGGAKAEASAIRDFDNSVVSGFQLATLSGPMCE
EPLMGVCFSVERWDMNFPTQRTHLDSVTEEDSNSLDASVSESPGEAAGHPEASGKAGGAG
ETPSHPEGAVAGAIQGRRRAEVVAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAM
YTCEIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRT
SGLASPQLVFSHWEVISSDPSWVPTTEEEYLHFGVKADSANQALKYMNGVRRRKGLYVEE
KIVEHGEKQRTLSKNK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatccagccaacgtcagg
aacctgtgcattctggcacacgtggaccacggcaaaacaactctggcagatagcttggtg
gccagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
tctggggagaaggactacctgataaacttgattgactctccgggccatgtggacttttcg
tctgaggtgtccaccgccgtcagactatgtgatggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcatggctggagaacatcagg
cctgtgctggtgatcaacaagattgaccggctcatcatggagctgaagctcacctcccag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctccaaagtgctggaggaccgcgcggtgaaagaggagcgggcggaggaagataag
gaggagggggacatcgagcctgctgagtgtcccgggttagagcaggtgtacgactggagt
gccgggctagaggattcggatgactcccagctctacttctctccagaccaggggaatgtg
gtcttcgccagtgccatagacggatggggcttcagtatccagcagtttgctcagatccac
agccagaggatgggcatcagggctgaggtgctcctgaagactctctggggagacttctac
ctcaatgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagcctctg
tttgttcagcttgtcctggacaacatatggagtttatatgacgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
tcgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccgtc
tcacaggctgtgctgttcatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggaactgaagaccgcattcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttatggtggacgccaaggccctgccacagaacaaacagagg
ccgttgacccaggaggagatggcccagcgcagggagctggccagacagagacacactgag
agactggcagccattcagcagacggaaagtggggagggaaatggccaatcaggaagtaca
acaccggcaaccactcctggtggagacaacaccataggtagtgagggtgtctcaggccag
atacagggcctgcctctgaaggctaaaccagaggaggaggaggagaaggagacgttcgta
gccttcgccagagtctacagcggggtggtccgcagaggacagaaggtgtttgtgatgggg
cccaagtacgaccctgcacaaggcctgcgcatgctcccagagggcagtactagtgtgagt
gcctgtctccctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctg
atgggcagagagctggaggaactagaagaggtgccatcagggaacgtactgggtattggc
ggtctcgaggagtgtgtgttgaagtctgcgaccctctccacctcccctgccctcccccct
ttcatccccctcaacttcgaagctacgcccatcgtacgagtggccatcgaacccaaacac
ccaagtgagatgcctaagctggtacggggtatgaggctgttgaaccaggctgacccgtgt
gctgaggttctgatccaggagacaggagaacacgtactggtcacggccggagaggtccac
ctgcaacgctgtctggacgacctccgagagaggtttgccaagattgagatcagtgcctcc
aagcctatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaat
gaagacctggggaaacaacagaaggtggcggtgatccaccaggtgaaagagtcagacacc
ctgcacctggaccccagcggcctggtgaccctcaccacccccaacagacaggccaccgtg
ggggtacgggccataccactacccgaagaggtgactcttctactggagggtagtgctgac
ttgatccggaccctggagcaggcaggtcaggcccagagagaggggaggaccctggacatg
agtacctggaccctagatgccctgatggtgctaaagagcaggctggaggtcctgctgcag
gggaggaagtggaggaacgctgtggaccggatatgggcctttggaccacgcaggtatgga
ccaaacatcctccttaacagcgtagaggggtaccagagaccatccgtgtggcactgcctc
gaacgagagaaaggagagaaagagggaggggcaaaagctgaggccagcgccatccgagac
tttgacaacagcgttgtcagcggtttccagctcgccaccctctctggtccaatgtgcgag
gagcccctcatgggcgtctgcttctctgtggagagatgggacatgaacttccccacccag
cgcacccacctggactctgtgactgaagaagactccaactcccttgatgcatctgtttcc
gaaagccccggtgaggctgcaggtcacccggaggcctcaggcaaggcagggggagcgggt
gagacgccttcccatccagagggtgccgtggctggggcgatccaggggagacgcagggcg
gaggttgtggccgggctagtggactgctacgggccgttctctggccagctcatagctgct
gtgaaggaggcttgtcggcacgcgttccaggccaaacctcagagactcatggctgctatg
tacacctgtgaaatcatggctacagcagaggtgttaggtcgtgtgtacggggtcctgggg
aagagggagggccgagtgttacaggaggagatgaaggaggggacggagatgttcatcatc
aaggccgtccttcctgtggccgagagcttcggattcgctgatgagatacgcaagagaacc
agtggattggctagtccacaactggtcttcagccactgggaggtgatctccagtgatccg
tcctgggttcctaccacagaagaggagtacctccactttggagtgaaggctgattccgcc
aatcaggctctgaaatacatgaacggtgttcggcggcgtaaagggctgtacgtggaggag
aagatagtggagcacggcgagaaacagagaacactgagcaagaacaaatag
DBGET
integrated database retrieval system
