Oncorhynchus kisutch (coho salmon): 109876838
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Entry
109876838 CDS
T09179
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109876838
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109876838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109876838
NCBI-ProteinID:
XP_020324794
Ensembl:
ENSOKIG00005030176
UniProt:
A0A8C7IAU0
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MYSMMMETDLHSPVPQTNTNSGHTGGSSNGNKVNQDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLTGTGGGGVGLGMSPGVGQRLDSPGGHGGASAASYAHMNGWANGAYSGQVAA
AAAAAAMMQEAQLAYSQHPGSGHHHHSHHHHPHNPQPMHRYDMSALQYSPISNSQSYMSA
SPSGYGGIAYTQHQSSGVASSGSMGTLGSLVKSEPSVSPPVSTHSRAPCPGDLRDMISMY
LPTGEAAGDPSVQSRLHALPQHYQSSTTGYLKKRTTLW
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatgatggagactgacctacactccccagtgccccaaacgaacacgaat
tcggggcacacgggaggatcaagcaatgggaacaaagtcaaccaagaccgcgtaaagaga
ccgatgaatgccttcatggtttggtcccggggccagcggcggaagatggctcaggagaac
cccaaaatgcacaactccgagatcagcaagcggctcggcgccgagtggaaggtgatgtcc
gaggcggagaagagacccttcatcgacgaggcgaagcggctacgagctatgcacatgaag
gagcatccggattataaatacagaccgagacggaagaccaagacactgttaaaaaaggac
aaatactctttggccggtgggctgcttaccgggacagggggtgggggtgtcggtctaggg
atgagccctggggtcggacagaggttagacagtcccgggggtcacggtggtgcgtctgct
gccagctacgcgcacatgaatggctgggcgaacggtgcgtactcggggcaggtggctgca
gctgcggcggccgcggccatgatgcaggaggctcagctcgcctacagccagcacccgggc
agcgggcaccaccaccactcacaccaccaccacccgcacaacccccagcccatgcaccgc
tacgacatgtcggccctccagtacagccccatctcgaactctcaaagctacatgagcgcc
tctccgtccggctacggcgggatcgcctacacgcagcaccagagctctggtgtcgcctcg
tccgggtcgatgggcacgctgggctctctggtgaaatcggaaccgagtgtgagccctccc
gtctctactcactcgcgcgccccgtgtcccggggacttgagggacatgataagcatgtat
ttaccgacgggggaagctgcaggtgacccgtccgttcaaagtagacttcacgcgctgccg
cagcactaccagagctccacgacagggtacctaaagaaaaggacgacgttgtggtag
DBGET
integrated database retrieval system
