Oncorhynchus kisutch (coho salmon): 109877037
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Entry
109877037 CDS
T09179
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03030
DNA replication
oki03410
Base excision repair
oki03420
Nucleotide excision repair
oki03430
Mismatch repair
oki03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109877037 (pold1)
03410 Base excision repair
109877037 (pold1)
03420 Nucleotide excision repair
109877037 (pold1)
03430 Mismatch repair
109877037 (pold1)
03440 Homologous recombination
109877037 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oki03032
]
109877037 (pold1)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109877037 (pold1)
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109877037 (pold1)
DNA replication proteins [BR:
oki03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109877037 (pold1)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109877037 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
109877037 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
109877037
NCBI-ProteinID:
XP_031670025
Ensembl:
ENSOKIG00005037203
UniProt:
A0A8C7JDG5
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDAKRRNSGPPRGGASQAKRGKTGGDWEDSPSIFEEELALFEEADMEAEEREGQAGHDVI
PVGELFSADLNPRWRRPQAAPLNPDSDTLVFQQIDLDYYLGAVVAGMPGQSQGNVPIIRM
FGVTDSGNSVCCHVHGFAPYFYIPAPNGFTSDHLSEFKRELNSAVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRIADFLRITMAMPRLIAPAKRLLEQGFKFEPFPIQSFSSYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREERMLGETDAHHPGKESLCQYEVDVGWTQLI
SHPAEGEYQRIAPLRVLSFDIECAGRKGIFPEAEKDPVIQIASMVQRQGEKEPFIRTVFT
LQSCSSIVGSQVLCFTKESQLLQSWAEFVRTVDADIITGYNIQNFDLPYLLNRAATLKVK
LFPYLGRVQGIKSVLRDSSFQSKQMGRRENKILNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQGLVMPVVKPEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLGLTPEDFIKTPTGDLFVKSSVRKGLL
PDILEDLLSARKKAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTIANGYQADAKVIYGDTDSVMVKLGVDTVSRAMEVGR
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDN
CTLVANLINTCLQTILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAA
KQAHVELAERMKKRDAGSAPQLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFATKRSACIGCR
AVLKDDAAVCDFCKKKESELYQKEIFHLSTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaaaaggcggaatagcggtccgccgaggggcggggcgtcccaggccaagcgt
ggtaaaactggcggggattgggaagacagcccgtcgatcttcgaggaggaactcgccctt
ttcgaagaagctgatatggaggcggaggagagggaaggacaggcggggcatgacgtcatc
cctgttggtgagctgttctctgctgacctcaacccccgatggcgtaggccgcaggccgcc
cctcttaacccggactctgacaccctggtcttccaacagattgacctcgactactattta
ggggctgttgtggctggcatgccgggtcagtctcaggggaatgttccaataatccgcatg
tttggggtgactgacagcgggaacagtgtgtgctgccacgtgcacggctttgccccctat
ttctacatccctgcccccaatgggttcaccagtgatcacttgagtgagttcaaaagggag
cttaactctgctgtgctgaaggacatgcgctccaacaaggacaacatatcggtcactgtg
ctggcggtggacatcacacgcaaagaaagtatgtatggttaccatgggaaacggattgcg
gacttcctgcgcatcaccatggcaatgccccgtctgattgccccagcgaagaggctcctg
gagcagggatttaagtttgaaccattccccattcagagcttctcttcctacgaggctaac
atcgactttgagatcaggtttatggtggacagcgatgtggtgggttgctgctggattgag
ctgcccaaagggaagtaccgggtgagggaggagaggatgttgggggagacggacgctcac
cacccaggcaaggagtctctgtgtcagtatgaggttgatgtgggatggacccagctgatc
agtcacccagcagagggagagtaccagaggatcgctcctctcagggttctcagctttgac
attgagtgtgctggaagaaaagggatttttccagaggcagagaaagacccagtgatccag
atagcctccatggtgcagcgacagggagagaaggaacccttcatccgcaccgtcttcacc
ctccagtcctgctccagcatcgtgggctcccaggtcctgtgctttactaaagagagccag
ttactacagagctgggctgagtttgtgaggacagtggatgcagacatcatcactgggtac
aacatacagaactttgaccttccctacctgctgaacagagcagctaccctgaaggtcaag
ctgttcccctacctgggcagagtacagggcatcaagtcagtcctgagagactccagtttc
cagagcaaacagatgggccgcagagagaacaagatcctcaacatggagggacgagttcag
tttgacctgctccaggtgctgctgagggactacaaactgcgctcgtacacactcaacgcc
gtcagcttccacttcctgcaagaacagaaggaggatgttcagcattctatcatcacagat
ctgcagaatggtaatgagcagacccggaggcgcctggcggtgtactgcctgaaggatgcc
tacctgcccctgcgtctgctgcagaagctgatgtgtgtgatcaactacatggagatggcc
agagtcaccggggttcccctcacctacctgctctccagaggccagcagatcaaagtggtg
tcccagctactgcggcaggcaatgaaacaggggctggtcatgccagtggtgaagcctgag
ggaggtgaagactacactggagctacagtcattgagccagagaaaggatactacagcgtc
cccatcgccaccctggatttctcctcgctgtatccctccatcatgatggcccacaacctc
tgttacaccaccctgcttcagaagggctcagcggagaagctgggtctgaccccagaggac
ttcatcaagactcccacaggagacctgtttgttaagagctcggtgaggaagggacttctg
cctgatatcctggaggacctgctctctgccaggaagaaggccaaagcggagctgaaaaag
gaaacggatcctttcaagaaacaggtccttgacggtcgacagctcgctctcaaaatcagc
gccaactccgtctatggctttacaggggctcaggtgggcaagctgccctgccttgagatc
tcacagagtgtgactgggtttggcagacagatgattgagcagaccaaacagctggtggaa
tccaagtacaccatcgccaacggttaccaagccgatgccaaggtcatctacggggacacg
gactccgtcatggtcaaactgggcgtggacactgtgagcagggccatggaggttgggagg
gaggcggcagagtgggtctcctcccacttcacccctcccatcaaactggagtttgagaag
gtgtactacccctatctgttgatcaacaagaagcgctacgcaggcctctacttctcctcc
agcgccgacactcacgacaagatggactgcaagggtatcgagacggtccgcagagacaac
tgtaccctggtggccaatctgatcaatacctgcctgcagaccattctgatagacagagat
ccccagggtgcggtggcccatgccaaagaggtgatctctgacctgctgtgtaaccgcatc
gacatcagccagctggttatcaccaaggagctgacccgcacagcccaggagtacgctgcc
aagcaggcgcatgtggagctggctgagaggatgaagaagagagacgcgggtagtgccccc
caactgggagacagagttccctatgtcatcatcaaagctgccaaaggagtagcagcatat
atgaagtctgaggatccaatctatgttctggagaacaacattcccattgacacccagtac
tacctggaacaacagctctccaagccactgctccgcatctttgagcccatcctgggagag
agcaaagcagagagcgttttactgaagggggatcacacgcgctgtaagacagtgttgacc
tccagggtgggggggctcatggccttcgccaccaagaggagcgcctgtatcggttgcaga
gcagtgctgaaggacgatgcggctgtgtgtgatttctgtaagaagaaggagtcggagctg
taccagaaagagatcttccacttaagtactctggaggagcgcttctctcgcctgtggaca
cagtgtcaacgctgtcagggctctctccatgaggatgtgctctgtaccagccgggactgt
cccatattctacatgaggaagaaggtgcagaaagatctggatgatcaggagaagctggtg
tctcgctttggatggtga
DBGET
integrated database retrieval system
