Oncorhynchus kisutch (coho salmon): 109877332
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Entry
109877332 CDS
T09179
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109877332
Pattern recognition receptors [BR:
oki04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109877332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
LRR_6
PRY
NOD2_WH
SPRY
zf-C3HC4_4
zf-C3HC4
LRR_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
DUF1512
zf-RING_6
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
109877332
NCBI-ProteinID:
XP_031669942
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MSLSGEKEEGGPASKRSLSGEKEEGGPASKMRHSGEKEEGGPASERSLSGEREEGGPASE
RSLSGEREEGGPASKMRHSGEKEEGGPASERSLSGEHDTKAKRVRQKRPDSPVPSCVSMK
SDSSMEQPIKFRKGDCTTDPRVRQKRPDSPVPSCVSMKSDSSMEQPIKFRKGDCTTDPSS
LEEDQSRCAVCQQVQRDPVSITCGHRFCRQCITRYWEKPAPSGDYDCPQCRKKSRTLPVL
RHLSEPNDARGSEIMDDSLQRAIVNHKDSLTRRYACVKEGLEKAGNQTPLNRIYTELYIT
EGESEGVNNEHEVWQLETATRTPTSHDTAIHCNDIFKPLPGQERSIRTVLTKGIAGIGKT
VSVQKFILDWAEGKANQDVDVIFLLPFRELNLIKDQQYSLLRLLNDFNTELDIGNAKKLT
ACKAMFILDGLDESRLPLDFQHIEMVSDVTQASSVDVLLTNLIKGNLLPSALLWITTRPA
AANQIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVF
CWISATVLEHMLSTDKSREMPTTLTEMSIHFLLIQTSLKNQKYHGRDEMDQEEIMESDKE
IILKLGKLAFEHLEKGNLMFYEEDLKECGIDVKEASVYSGLCTQIFKEESVLFQRIVYCF
VHLSIQEFLSAVYIYHCYTTKNMVELKPFLKRKSRAASEELTLDELLKSAVDKALESKNG
HLDLFVRFLHGMSLESNKKLLRGLVTQTESSPESVQRTIRSLTVMQRKNISPERCINLFH
CLIEMKDQSVQEEIREYLTSEDRSKNLSLAHCSALAYTLQISEVVLDVFDLKEYKTSEEG
RRRLLPAVRGCRKALLTDCELTDTSCEVLVPALSSTSSHLRELDLSNNDLKDSGVKLLSV
GLGNPHCKLETLRLADCELTDTSCEVLVSALSSTSSHLRELDLSNNDLKDSGVKLLSVGL
WNPHCKLETLRLTGCKLTDTSCEVLASVLSSTSSYLRELDLSNNDLKDSGVKLLSAGLGN
PHCKLETLRLSLCGVEEEGCASLVSALRSNHSHLKELDLSNNRSGDSGVRLLSAGLEDPH
CRLEKLNVEPGGVYTIKPWPRKYACDLTLDPNTVNQQLSLSEENRKVTRRREKQPYPDHP
ERFEIWKQVLCREGLTGRCYWEVEWSGRGAYIAVTYKGISRRGKSTDCLIGLNDKSWSLQ
CSDQHYTAWHNHKPTSIEAPSSSFHRVGVYLDWPAGTLSFYRVSSDTLTHLHTFTSTFTE
PLYPGFRFYCDTSVSLCQV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggagaaagaggaggggggccctgcctctaaaaggagtctctctggg
gagaaagaggaggggggccctgcctctaaaatgagacactctggggagaaagaggagggg
ggccctgcctctgaaaggagtctctctggggagagagaggaggggggccctgcctctgaa
aggagtctctctggggagagagaggaggggggccctgcctctaaaatgagacactctggg
gagaaagaggaggggggccctgcctctgaaaggagtctctctggggaacatgacaccaaa
gctaagagggtccggcagaagagaccagactcacctgtacccagctgtgtgtccatgaag
agtgactcatctatggagcagccaatcaaattcagaaaaggagattgtaccactgatcca
agggtccggcagaagagaccagactcacctgtacccagctgtgtgtccatgaagagtgac
tcatctatggagcagccaatcaaattcagaaaaggagattgtaccactgatccaagctct
ctggaagaggatcagtccaggtgtgcagtgtgtcagcaggtgcagagggatccagtctct
atcacctgtggacacaggttctgtagacagtgcatcaccagatactgggagaaacctgct
ccttcaggagactatgactgtcctcagtgtagaaagaaatccagaacacttcctgtacta
cggcacctgagtgaacccaatgatgcaagaggctctgaaatcatggatgacagcctacag
agagctatagtaaaccataaagacagtctgacaaggaggtatgcatgtgtgaaagaaggc
ttggaaaaagcagggaatcaaactcccctcaacaggatttacacagagctctacatcaca
gaaggagagagtgaaggggttaacaatgaacatgaggtgtggcagctagagacagcaacc
aggacaccaacctcacatgacacagcaatccactgcaatgacatctttaaacccttacct
ggccaggagagaagcatcagaactgtgctgacgaagggcatcgctggcatcggaaaaact
gtctctgtgcagaagtttatcctagactgggctgaagggaaggcaaaccaagatgtggat
gtcatatttctgcttcctttccgggagctgaacttgattaaagatcagcagtacagtctt
ctcagacttttaaatgacttcaacacagaactagacataggcaatgcaaagaaactcact
gcctgtaaagctatgttcatcttggatggtttggatgaaagcagacttccattggatttt
caacatattgaaatggtgtctgatgtcacacaggcatcgtctgttgatgttctgctaaca
aatctcatcaagggaaatctgcttccctctgctctcctttggataactacacgacctgca
gcagccaatcagatcccttcagggtgtgttgaccaggtgacagaggtacgagggttcaat
gacccacagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcaga
atcatctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttc
tgttggatttctgcaacagtccttgaacacatgttgagtacagacaagagcagagagatg
cccacgactctgactgagatgtccatacacttcctgctcattcagaccagcctgaagaac
cagaagtatcatggaagagatgagatggatcaagaggagatcatggagtcagataaggag
attattctgaagctggggaagctggcgtttgaacatctggagaagggtaatctcatgttc
tatgaagaagacctgaaagagtgtggcattgatgtcaaagaagcctcagtgtactcagga
ttgtgcacacaaatctttaaagaagagtctgtgttatttcagagaatcgtgtactgcttt
gttcatctgagcattcaggagtttctctcggctgtctacatttaccattgttacacaacc
aagaacatggttgaactgaagcccttcctcaagagaaagtctagagctgcgtctgaagag
ctaaccttggatgagctgctgaagagtgctgtggataaagccttggagagtaagaatgga
cacctggacctttttgtccgcttccttcatggcatgtcactggagtccaataagaaactc
ctacgaggtctggtgacacagacagaaagcagtccagagagcgtccagagaacgatccga
tcccttacggtgatgcagaggaagaacatctcccctgagaggtgcatcaatctcttccac
tgtctgatagagatgaaagaccagtcagtccaggaggaaatccgtgagtatttgacgtca
gaggacagatccaaaaacctctcccttgctcactgttcagcgctggcctacacgctgcag
atatcagaggtggttctggatgtgtttgacctgaaggaatacaagacgtcagaggagggc
cgtaggagactgctccctgctgtaagaggctgcaggaaagctctactcactgactgtgaa
ctcacggacacatcctgtgaagtgttggtcccagctctcagttcaacctcctcacacctg
agggagctggatctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgtt
ggactggggaatccccactgtaaactggagactctgagactcgctgactgtgaactcaca
gacacatcctgtgaagtgttggtctcagctctcagttcaacctcctcacacctgagggag
ctggatctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgttggactg
tggaatccccactgtaaactggagactctgagactcactggctgtaaactcacagacacg
tcctgtgaagtgttggcctcagttctcagttcaacctcctcatacctgagagagctggat
ctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgctggactggggaat
ccccactgtaaactggagactctgaggttgtcgctctgtggagtcgaagaggaaggctgt
gcatctctggtctcagctctgaggtcaaaccactcacacctgaaagagctggacctgagt
aacaatcgctcaggagactcaggagtcagactcctatctgctggactggaggatccacac
tgcagactggagaaactcaatgtggaacctggtggagtgtacacaatcaaaccttggcct
agaaaatatgcctgcgatctcacactggacccaaacacagtaaaccaacagctctctctg
tctgaggagaacagaaaggtgacacgtaggagagagaagcagccgtatcctgatcaccca
gagagatttgagatctggaaacaggtgctgtgtagagagggtctgactggacgctgttac
tgggaggtagagtggagtgggagaggggcttacatagcagtgacatacaaaggaatcagc
aggagaggaaagagtacagactgtctgattggattaaatgacaagtcctggagtctgcaa
tgctctgaccaacattacacggcctggcacaatcataaacccacttccatagaagccccc
tcatccagcttccacagagtaggagtgtatctggactggccagccggcactctgtccttc
tacagagtctcctctgacacactgacccacctgcacacattcacctccacattcactgag
ccactctatccagggtttaggttttactgtgacacctcagtgtccctgtgtcaggtgtag
DBGET
integrated database retrieval system
