Oncorhynchus kisutch (coho salmon): 109877412
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Entry
109877412 CDS
T09179
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109877412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109877412
NCBI-ProteinID:
XP_031667807
Ensembl:
ENSOKIG00005047905
UniProt:
A0A8C7N8B3
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MAVATVISGNRVEKSGFLEVLVRDRWHNVLANLNGEALTLSCEDLGENVTLNGLTNGSYG
CNATQPDHTNSPKTAVRTAFTDLQEQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKM
PILISKIFKGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQGLKRAGREVTLEVKYMR
EASPYVKKGSPVSEIGWETPPPESPRLGSPHCDVPISPTMSLQGDRRYIPLKMCYVSRSM
TSPDPGNRQLELHSPDAKHTVVLRCRDTASAQAWFEVMQSATSNLIHKVITEVKEHTGRT
GIAGSREIRHLGWLAEKTENEKKQWKPVLVMVTEKDLLLYHSLPRMKASWHSPAHTYPLL
ATRLVHSGPDRGSPQPGVELSFATRTGTRLGIEAHLFRAETCQDLSLWTRHIVTGCHSSA
QMIKEVTTSCVYKGQECRLVIHYEQGFSVLAEQKGEDQVDQGNQNQAKPLLCYPFERLKM
SSDDGVRMLFLDFSGKEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctacagtaatatcggggaaccgagtagaaaaaagtggatttttagaggtt
ttagtgagggaccgatggcacaatgttttggccaacttgaacggagaagctctaacgttg
agttgcgaggacctgggagagaatgtgaccctaaacggcctcaccaatggatcttacggg
tgcaacgcaactcaaccggatcacacaaacagtccgaaaactgcggtgaggacagctttc
acggatttacaggagcaagtcccagaggcgatcgcaaacagaaaaagatgtgtgaaagta
ataaagcaagaggtaggaggactcggcatcagcataaagggaggaaaagagaataaaatg
ccgatacttattagtaagatcttcaaaggtctggctgcggatcaaacccaagccttgtat
gtcggtgacgcgattctgtccgtgaacggtgtgaacctgcgggacgctacgcatgacgag
gcggtgcaggggctcaaacgagccgggagagaggtgacgctagaagtgaagtacatgaga
gaagccagcccctatgtgaagaagggttctcctgtgtcagagataggctgggagacgccc
ccacctgagtccccgaggctgggtagcccccactgtgacgtccccatcagccccaccatg
tccctacagggggacaggaggtacatccccttaaagatgtgttacgtgtccaggagcatg
acgtctccagaccctggaaacaggcagttagagctgcactctccggacgccaagcatacg
gtggtgttacggtgtagagacacagcctcggcccaggcctggttcgaggtcatgcagtcg
gcgacctctaacctcatccacaaggtcatcacagaggtcaaagagcacacgggaagaaca
ggaatcgcagggagcagagagatcagacacttgggctggctggctgagaagacagagaat
gagaagaagcagtggaagccagtgctggtgatggtgacagagaaagacctgctcctctat
cacagccttccacgcatgaaggcttcctggcacagccctgcacacacatacccactgtta
gctacacggctggtgcactctggtcccgaccgaggctctccccagccgggcgtggagctg
tccttcgccacacgtacgggaaccagactgggcatcgaggcccacctgttcagagctgag
acctgtcaggacctttcactgtggaccaggcacattgttacgggctgtcactcctctgcc
cagatgatcaaagaagtcactaccagctgtgtgtacaagggccaggagtgcaggctggtg
atccactacgagcagggcttctctgtcctggctgagcagaagggggaggaccaggtggac
caggggaaccagaaccaagccaaacctctcctctgctaccccttcgaacgcctcaagatg
tcctccgacgacggggtcaggatgctcttcctggatttcagtggaaaagagggtgaaatt
cagctggacctccactcgtgcccaaagcctatcgtcttcatcctccactcattcctctcg
gcaaagatcgccagactcggcctggtagcataa
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integrated database retrieval system