Oncorhynchus kisutch (coho salmon): 109877586
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Entry
109877586 CDS
T09179
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109877586
03036 Chromosome and associated proteins [BR:
oki03036
]
109877586
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109877586
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109877586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Sigma54_CBD
Motif
Other DBs
NCBI-GeneID:
109877586
NCBI-ProteinID:
XP_031673977
Ensembl:
ENSOKIG00005027975
LinkDB
All DBs
Position
Unknown
AA seq
1837 aa
AA seq
DB search
MVGRYLSSELPPQSGPGAHYENPHWGHQPANRSATSASASANHSGWDTVIIDESDTEAWP
SISRSSQSQGPAGGCPSDTDPASSSSSMSMATGANGQTGHFPANYPSSKGASSGPGSSAN
HPGAGTVSMASSQGAANRGWGSGPGPSPHGPPQSSSVGGGEGKSDGPMGGGGGRGWGSSS
STTSNLNLNPNANPSAWPVLGHDGGGGAGASSSGGANPNQPPSSQPPPNLCDPPGTSHAQ
GNGIRGGNMVGGTNGNLPVGGGSTWGESSEPHPSSSTNVSFSSEPQNLNTDGPNHTSKQQ
EPHIHSVSGWSGPSGGMSSLGQPPPGASQLVNGEDGSSIWGNNGDAKSVASSTEPSGWDS
GAGGWGSHGSSGGGPSGGWGGQSSRDAWGKQHSGEVQGGWDAPSSPPQQARSWSTRAPST
MAASEGSSEGMDGAGHSLRQDRSSRDEPAPLLPAPDLDPRVLCNTGWGQTPVRQHTSWDM
EEAARTQRKADAAGTDSWGGSGPNTPTEPAQGPSNPSHGPPHRVDPKSEGPGPGPQAAPG
WGGSKPPASQPGSGWGEPPSSKNGPGGWGNPPPGGPGSGPNMPKAGSQSWGAPEEKSPSW
DGSHGKAPKPQGWGDGPKPPHSGWGNSAGGGGNGGGGDWREPADGKKNSPTTNPPWEGEG
AGGWKESNRGWGKPGPGMGGNVGGGWGEPAMAQQRPSCPAQGWGGKHQESSNGNSGGVRG
SMGGAGGGEGSMGSWGGPGSVKPSVSGREGNGGGGGSKQDPSGLEPTGWEEPSPPSIRRK
MEIDDGTSAWGDPGAYNKTVNLWDKNNPGGGGPPQGRPPGNAPACPPGNNNHPPHHTYHG
PPPPLQSHGGHNPQGPGQNSGPVDTAMPHQTAPPPHSRPPLMGPGWGEPSSAHPKPEPSW
GEPAPPLVSVDNGTSAWGKPTGSHGGWGVGDNSPEPYRRGNAPLGSAPCKPAPKSMQDGW
GGGGGGEDMGLSGGPWDPDDGDMWSSQASQESNSWGNRPRKAPPKGKIPGKQEEAWIMNR
LIKQLTDMGFPRDPAEEALKRNNMNLDQAMSALLEKKTELDRRGMGMSDYNNCLINKGPM
GCRPPLHSKESSSDRSPFLDKDGVGSLVEDVHTSSPFMPCSPGPLGLKLPSLPLSSQGLG
GPQGLAMQNLNNRQMQSGMLGCSSAAQARAMQQPPPQPPVPPLGSSQPSLRAQVPQFLSP
QVQAQLLQFAAKNIGLNPALLTSPINPQHMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVS
GPIRQQEQHVARTINNMQQQIQQHQRQLAQALLIKQQQTLGSLSSSGLHHGQGKSALDLF
PGHPQAPGLPDLQTKEQQSSPNSYSPYPLSGLNPNMNVTCIEVGGLSMKELPQPQSRLSQ
WTHPNSMDSLSGGSSSLEPNLNKHGSNLGPPGKPPQMEDGYSPYGMMPVSESPTNPLVPP
DSWSQGKSPNDKMVNGANITWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNI
QDVNRYLQRDRSGDSLSLPFPFAGCDAPIGSSPTSSQNEALPPSTDWPVSAYSSSFSLSS
PETDDPGKLSDMKSTWSPGPISHPSQVSLSHELWKVPQGPRSNTAAPTRPPPGLTNPTKH
SSTWGGNSLGLAQGWSSSYSSAATTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHG
PLITFHLNLTQGNALVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVQRFFAQGQQ
LASTTSWQADPGVNQTRMGGSGPRSSHPIGHPHWNSGGSGGGMGGGGAKTAGDLLWGGVP
QYSSLWGPPSGEEGRVMGSPTPINTLLPGDLLSGESM
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaggtacctctcctcagagctgcccccacagagtggcccgggagcccattat
gagaatccccactggggacaccagccagccaatcggagtgccacttccgcctcagcgtcg
gccaatcacagtggctgggatacagtgatcatcgacgagagcgacaccgaggcctggccc
tccatttcccgcagcagccagagccagggccctgcaggaggatgcccctcggacactgac
ccagccagcagcagcagcagtatgagcatggccacgggggccaacggccagacaggccac
tttcctgccaactaccccagcagcaaaggagccagctctgggcccggcagctcagccaat
caccccggggcaggcacggtcagcatggcctccagccaaggagcagccaatcggggctgg
ggatctggtcccggtccctccccccatggccctcctcagtcctcctctgtcgggggtggg
gaggggaagagtgatggcccaatgggaggaggaggaggcaggggttggggctcctcttcc
tccaccacctccaacttgaacctgaaccccaatgccaacccctcggcctggcccgttctg
gggcacgacgggggcggaggagcgggggcaagcagctcagggggagccaaccccaatcaa
cccccttcttctcaaccccctccaaacctctgtgacccgccaggcacctctcacgcccag
gggaacggcatcagaggaggaaacatggtgggcggcaccaacggcaaccttccggttggg
ggaggcagcacctggggagaatcatctgagccacacccatcctcatccacgaatgtgtct
ttcagctcagaacctcagaaccttaacactgacggaccaaatcatactagcaagcaacag
gagccccatatccacagcgtgtccggctggagtggcccctccggaggtatgagctccctg
ggccagcctcctcctggagcttcccagctggtcaatggagaggatggtagctccatctgg
ggcaacaatggagacgccaagtcagtcgcctcctccacggagccttcgggctgggactct
ggggccgggggctgggggagccatggaagcagtggtggtggaccctctggaggctgggga
ggccagagcagcagagacgcctgggggaagcagcattccggcgaggtccaggggggctgg
gacgcccccagctctcctccccagcaggccagatcctggagcacccgagcccctagcacc
atggcggccagcgaaggcagcagcgagggcatggatggagcgggacactccctccgacag
gaccgttcatccagggatgagcctgcccccctgctcccagcccctgacctggaccccagg
gtgctgtgcaacacaggctggggccagacccccgtccgccagcacacgtcctgggacatg
gaggaggcggcacgcacccaacgaaaggcagatgctgccgggacggactcttggggaggc
tccggtcccaacactcccaccgagccagcccaagggccctccaaccccagccacggaccc
cctcatcgggttgaccccaagagcgagggtcccgggcctggtcctcaggctgcccctggc
tggggtggttccaagcctccagccagccaacccggctctggctggggtgagccaccgagc
agcaagaacggtcctgggggctgggggaaccctccaccaggaggccccgggtcaggcccc
aacatgcccaaagctgggagccagtcctggggtgctccagaggagaagtccccaagctgg
gatggttcccacggcaaggcccccaagccccagggctggggagatgggcccaagccgccc
cacagcggctggggcaacagcgctggaggagggggcaatggaggagggggggactggaga
gagcctgcagatggcaagaagaacagtcccaccaccaaccctccctgggagggagaagga
gcaggaggctggaaagagagcaaccgaggctggggaaaacctggtccggggatgggggga
aatgttggtggaggctggggagagccagcgatggcccagcagcgcccaagttgccctgcc
caaggatggggcggcaagcaccaggagagctccaacggcaatagcggaggagttagaggg
agcatgggcggggcaggaggtggagaagggagcatgggatcctggggaggccctggctcc
gtgaagcccagtgtatcaggccgggagggcaacgggggaggaggagggagcaagcaggac
ccctcaggattagagcccacagggtgggaggaaccttccccaccctccatccgacgcaag
atggagattgacgacggcacctcggcttggggcgacccgggtgcctacaacaagacggtc
aacctctgggacaagaacaaccctgggggaggagggccaccccaaggtagacccccaggg
aatgcccctgcatgcccccctggaaacaacaaccacccaccacatcacacctaccacggc
cccccaccacccctccagagccatgggggccacaacccccagggcccaggccagaacagt
gggcccgtggacacagccatgcctcaccagactgcgcctccaccacacagcagaccaccc
ctcatgggtccaggctggggggagccttccagtgcccaccccaaaccagagccctcctgg
ggggagcctgctccccctctggtcagcgtggacaacgggacctccgcctggggaaaaccc
accgggagccatgggggctggggtgtgggtgacaacagccctgaaccctacagacggggc
aacgcaccccttggatctgcaccttgcaaaccagcccccaaatctatgcaagacggctgg
ggtggtggaggtggcggggaggacatgggtttgtctgggggcccgtgggaccctgacgac
ggggacatgtggagcagccaggcctcccaggagagcaactcctggggcaacagacccagg
aaggccccacccaaggggaagattccgggcaagcaggaggaagcctggatcatgaatcgc
ctgatcaagcagctgacagacatgggcttccctagagatccagctgaggaggctctgaag
aggaacaacatgaacctggaccaggccatgagtgctctgttggagaagaagacggagctg
gacaggcgggggatgggcatgtccgactacaacaactgtctgatcaacaaggggccaatg
ggctgccggcctcccctccactccaaagagtcctcctcagatcgctcccctttcctcgac
aaggacggtgttggtagcctggtggaggacgtccatacctcctcaccgtttatgccttgt
tcccccggccccctcggcctgaaactcccctccctgcctctatccagccagggcctgggc
ggcccacagggcctagccatgcaaaacttgaacaacagacagatgcagagtggaatgttg
ggctgtagcagtgcagcacaagcccgggccatgcagcagcctcctcctcagccgccagtg
ccgcctctcggctcctcccagcctagtctacgcgctcaagtgcctcagtttctctcccct
caggttcaagcacagctcttacagtttgcagcaaaaaacattggtctgaatcctgcactt
ttaacctcaccaataaaccctcaacatatgacccttttgaaccaactataccagctgcaa
ctggcgtaccagcgtttacaaattcagcagcagatgttgcaggcgcagcgtaatgtttct
ggtcccatccgacagcaggagcagcacgttgcacgtacaatcaataacatgcagcagcag
atccaacagcaccagagacagctggcccaggccctgctgattaagcagcagcagaccctc
ggctccctctcctcctccggcctgcaccacggccaaggcaaatcagccctggacttgttc
ccaggccacccccaggctccgggcctacccgacctgcagaccaaagagcagcagtcgtcc
cccaactcctacagcccctaccctctctctggactgaatcctaacatgaatgtaacctgc
atagaggtgggaggcttgtccatgaaagagcttccccagccccagtctcgcctctcccag
tggacacaccccaactccatggacagcctctctggaggctcatcctctctggagcccaac
ctgaacaagcacggttccaacctgggcccccccgggaagcccccccaaatggaggatggg
tacagcccctacggcatgatgcctgtctccgagtcccccaccaaccccctggtgccccca
gacagctggagccagggcaagagccccaacgacaagatggtcaacggcgccaacatcacc
tggcctccagagttctgcccgggcgtgccctggaagggcctgcagaacatcgacccggag
aacgaccccaacatgaccccggggagcgtgcccagcggccccaccatcaacaccaacatc
caggacgtcaaccgctacctgcagagagaccgcagcggagattctctctctcttccattc
ccttttgctggatgcgatgcccccataggctcctcccccacctcatctcagaacgaggcc
ctgcccccctccaccgattggccagtcagtgcctactctagctcgttcagtctgtcgtcc
ccggaaacggacgacccaggtaaattgtcagacatgaagtccacctggtccccggggccc
atctcccacccctcccaggtctctctgtcccatgagttgtggaaggtcccccaggggccc
cgcagtaacacagccgcccccacacggccccccccgggcctcaccaaccccaccaagcac
tcctccacctggggaggcaactccctgggcctggcccaaggctggagcagctcctactcc
tcagcagctaccacatggagtacagacagctccaacaggaccagtagctggttggtcctg
aggaacctcactccccagatagacggctccaccctgcggacgctatgcatgcagcacggc
cccctcatcacattccacctcaacctgacccagggcaacgcattggtgcgctacagctcc
aaggaggaggccgccaaggcccagaagtccctgcacatgtgcgttctgggtaacaccacc
atcctggcagagtttgctggggaggaagaggtccagcgcttctttgcacagggccagcag
ctagcctcaaccaccagctggcaggctgacccaggtgtcaatcagacgcggatgggtggt
tccgggcccagatcctcgcaccccattggccacccccactggaactctggcggtagcggt
ggcggcatgggaggaggtggagccaagacggccggagatctgctctgggggggcgtgccc
cagtactccagcctatggggaccgcccagcggagaggaggggcgggtcatggggagtcct
actcctatcaacacgctgctgcctggggacctgctgagcggggagtccatgtag
DBGET
integrated database retrieval system
