Oncorhynchus kisutch (coho salmon): 109877720
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Entry
109877720 CDS
T09179
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109877720
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109877720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109877720
NCBI-ProteinID:
XP_031643018
Ensembl:
ENSOKIG00005035103
UniProt:
A0A8C7J5C9
LinkDB
All DBs
Position
LG13:complement(71985960..72021988)
Genome browser
AA seq
1472 aa
AA seq
DB search
MYSSESPQYLRQGLSMFVWTNVEPRSVPVFPWHSLVPFLAPTQSDASTQSGEGQQPINHP
QAASLKTESQGGAVLLQEANEDPPTLERGPTRPTPSTDDLAPEREREAERERPDSETESD
VDDPFFPSVLPEPPLSVTPVKRRTQSLSALPKDGDKISPNKREKDHIRRPMNAFMIFSKR
HRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKD
RKKSSSDARGLPGPGGKDIRERSMSETTEPHGVELKGVGPGLLGVSERNPGEGHVGQLPR
PRAFSQSAVHSLERCERGNTQALAELSQMCGDGGGQFSGRAQTLSRSQRGVSEDMTSDEE
RMVICEEEGDDDVIEDPYPASSIDLKCKERVTDSDSDNASGNESDRKRVFAPVICSSSSQ
PTPHGRSVSLSSYPSKRYDEERGGGLSDRRRKRGIEGGGGDGGGVASLSLSLSSSGHSVI
SSPGGPVPSALAPLGLSPLLGLGAVRVASTVVTNVVRPVVSTPVPIASKPRDGAASSIPH
PSDRRSLPLQQAQLLIGSGAGSGGPGYYSSSSPNPIGAGAGPGGLVTSLVFPGHSQSTVQ
LISPSPNPSSHHQLPPTAPVSAPTHNHTNGPLPLSLLQPQFLSSSSLASPGGKAITQVQY
ILPTLSASSNHKSPSPQLHNLPNSIFNLPTAPPTHMSIANGKQVGLGSLMGYASSPAVGV
VSPGARVQSQSPVLQGKMLLPMATVRTAPAQQYPLVAPPLPVQNGAQAGSKIFQIAPMPV
VQSQLQQGGAGHPGSPFPVTLGTATVLHQGSAPSQTVLLPPPPTRITYVESTPGVPSALP
LVSTTTGSSSPQQAQPPPGSAYVSSPLATLGFTAIAPPGQNLVQPLITGQPPLQAPVQSP
TCPSLPSGPASATGGQIITAIYPPSSVTMATGVVSMATGPPSMVYTVSSSSSLSTHILPK
YTFAPATPTTHTHTHTQLQSDRQTDRHVGERPTDRMSHSQSEKAADRQAETQPELQAYGQ
TDRPTLTQADRQTGREAQTFIKSSSLVAPPSGSSLSLRPCSPPLPSHTSTGSAPGTPKLP
QIPVRTPQKIKATVANIPVGSYEGGGRGKEREKNREREREKERENHGANSRFSFELERPV
ESTSPSQHTHTAEEPPSDRPPEGHDPGDNTDTCSTEASNESGWKDSVPSSPLPPPLGTDP
ALPPPQSDKDAPPPKKVKARPPPLKRTFDSVDKVLSEVYFEERFAQLPEFRPEEVLPSPT
LQSLATSPRAILGSYRRKRKNSTDLDSSTEDPVSPKRRSRRRSSCSSEPSTPKSAAKCEG
DVFTFDRPAPPSVCPPPGTGADGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGF
FPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAVPSETNEASSLPGPSGAQSGE
GTGGGAEPLGEEADREREGSPEEPRDSQESSR
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatcagaaagccctcaatacctccgtcaaggactgagcatgtttgtctggacc
aacgtggaaccccggtcagttcctgtgtttccctggcattcattggtccctttcctggca
ccaacccaatcagacgcctctactcagtctggcgagggccaacaaccaatcaatcatccc
caagctgccagtctgaaaacagagtctcaggggggtgcagtgctgctacaggaggccaat
gaggacccccccaccctggagagaggacccacaaggccaactccctccacagatgacctg
gccccagagagggagagagaggccgaaagagagaggccagacagtgagactgagagtgat
gtggatgacccgttcttccccagtgttcttcctgagccgcccttgtctgtgactcctgtg
aagagacgcactcagtccctcagcgccctgcccaaagatggggacaaaatcagccctaac
aagagggagaaggaccacatcaggcggccgatgaacgcgttcatgatcttcagtaagcgt
catcgagcgctggtgcaccagaggcaccccaaccaggacaaccgcacggttagcaagatc
ctgggcgagtggtggtatgccctggggcccaaagagaagcagaagtatcacgacctcgcc
ttccaggtgaaggaggcccactttaaggcccacccagactggaagtggtgcaacaaagac
aggaagaagtctagttctgatgcccgagggctcccagggccggggggcaaagacattaga
gaaaggagcatgtctgagaccaccgagccccatggtgtggagctgaaaggggtggggcct
ggcctgctgggtgtgtctgagcggaatccaggggaggggcatgtaggtcagctaccccgc
ccccgagccttctcccagagtgccgtgcacagcctggagaggtgtgagaggggcaacaca
caggccctggccgaactgtcacagatgtgtggggatggtggtggccagttttcggggcgt
gcccagaccctgtcccggtctcagaggggggtcagtgaggacatgaccagtgatgaggaa
cgcatggtcatctgtgaagaggagggagacgacgatgtcattgaggacccgtaccctgcc
agctccatagacctgaagtgtaaggagagagtgacggacagcgacagtgacaacgcctct
gggaacgagagcgatcgcaagcgtgtctttgctccagtgatctgctcttcctcctcccag
cccaccccccacggacgctccgtctctctctcctcctacccttccaaacgctacgacgag
gagagaggaggggggctctcagaccgcaggaggaagagaggaatagagggaggaggtggt
gatggaggaggagtggcatccctctctctttccctgtcctcctcaggccactctgtcatc
tccagccccggaggcccagttccttctgcccttgccccccttggcctgtctcctctcctc
gggttgggggctgtcagagtggcctctacagtggtgaccaatgtggttcgtccggtcgtg
agcacaccagtccccatcgctagtaaaccccgagacggagcagcttcatccattcctcac
ccatcagacaggaggtccctcccattgcaacaggcgcagcttctgattggctccggagca
ggaagcggagggcctggctactactcctcatcgtcacccaatcccataggtgcaggggca
ggtccaggggggctggtgaccagcttggtgttcccggggcacagccagtccaccgtccag
ctcatcagtccctcccccaatccgtcctcccaccaccagctgccccccaccgcccctgtc
tctgcccccacacacaaccacaccaacggccccctgcccctctccctgctccagccccag
ttcctctcctcgtcatctctggcatcccccgggggcaaagccatcacacaggtccaatac
atcctgcccaccctatcagccagctccaatcacaagagcccctcccctcagctgcacaac
ctgccgaacagtatcttcaacctgccgacagctccgcccacccacatgtccatagccaat
gggaagcaggtggggctgggctcgctgatgggatacgcctccagcccagccgtgggtgtg
gtcagcccgggagccagagtgcaatcccagtccccagtcctacagggcaagatgctgctt
cccatggcaacagtgaggacggcacccgcccaacagtaccccctcgtggcgccacctctt
cctgtccagaatggagctcaagcaggaagcaagatcttccagatcgctcccatgcctgtt
gtccaatcccagctccagcaaggcggggcagggcatcctgggagcccttttcccgttacc
ttgggaacggccacagtgttgcaccaaggttctgccccatctcagactgtgctgctgccg
cccccaccaaccaggatcacctatgtcgagtccacgccaggagtcccctctgctctgcct
ctggtctccacaacaacaggctcctcctcccctcagcaggcccagcccccccctggatct
gcatatgtttcatcgcccctagcaacgctgggctttacagccatagccccccctggacag
aacctagtccaacccctcatcacaggtcagcctccccttcaggccccagtccagtcccct
acctgcccctccctcccctctggcccagcctctgctacaggaggacagataatcactgcc
atctaccccccttccagcgtcaccatggcaactggggtggtctccatggctaccgggcca
cccagcatggtgtacacagtctccagctcctccagtctgtccacccacatcctgcccaaa
tacacattcgcccccgccacccccaccacacacactcacacacacacccagctccagtcg
gacagacaaacagacaggcatgtgggggagagacccacggacagaatgtctcactctcag
tcagagaaagcggcagacagacaagcggagacgcagcctgagctacaggcgtacggacag
acggacaggccaaccctcacacaggcggacagacagacggggagggaagcccagaccttc
attaaaagcagcagcttagtggcgcccccaagtggctcctcattgtcactgcggccctgt
agcccccccctgccctctcacacttccacaggcagcgcaccaggtacccccaaacttccc
cagatcccggtgagaacccctcagaaaatcaaagccacagttgccaacatcccggtgggc
agctacgagggaggaggccgaggaaaggagagggagaagaaccgagagagggaaagggag
aaagaaagagagaaccatggggccaacagtcgtttttcctttgagctggagcgtcctgtg
gagtcgacgtccccctcccaacacacacacactgctgaggagcccccctctgacagaccc
cctgagggacacgaccctggggacaacactgacacatgtagcacagaggccagcaacgag
tccgggtggaaggactccgtcccctcctcacccctgccccctcccttgggtacagaccct
gccctgccacctccccagagcgacaaagacgcccctcctcccaagaaggtgaaggcccgc
cccccgccactcaaaaggacctttgactctgtggacaaggtgttgtcggaggtgtatttt
gaggagcgttttgctcagctaccagagttcaggccagaggaggtgctgccctcccccacc
ctgcagagcctggccacctccccccgcgccattctgggcagctaccgccgcaagaggaag
aactccacagacctggactcgtccacagaggaccctgtgtctccgaagaggaggagcaga
aggcgctccagctgcagctcggagcccagcacacccaagagcgccgccaagtgtgaggga
gacgtcttcaccttcgaccgaccagcccccccgtctgtgtgtccccctccagggacaggt
gctgatggagaggacatcctgggggagctggagtttgacaaggtgccctattcctctctg
agacgtaccctggaccagagacgagccctcgtcatgcagctcttccaggagcatggcttc
ttcccgtcagcccaggccacggcagccttccaggcacgctacgcagacatcttccccacc
aaggtgtgtctgcagctgaagatcagggaggtccgacagaagatcatgcagactgccgtc
ccctctgagaccaacgaggcctcctcgctccccggaccgtctggcgcccaatcaggggaa
gggacaggaggaggggcggagccattgggagaggaggcagatcgagagagggagggtagt
ccagaagagccgagggattcgcaggagtcttctagatga
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