KEGG   Oncorhynchus kisutch (coho salmon): 109877774
Entry
109877774         CDS       T09179                                 
Name
(RefSeq) negative elongation factor B-like isoform X1
  KO
K15180  negative elongation factor B
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109877774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109877774
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     109877774
SSDB
Motif
Pfam: COBRA1 TPR_TNPO3_IPO13_4th
Other DBs
NCBI-GeneID: 109877774
NCBI-ProteinID: XP_020325561
Ensembl: ENSOKIG00005033416
LinkDB
Position
LG3:complement(21810242..21828738)
AA seq 581 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKDEDRYGKLKELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQENQALFGDEVSPLLKQYIVAKEAALFSSDL
SILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDSCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEEVLGDL
SMILCDPFSSNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMLSVLVDDYTFTVEQKLPCEEKTSLSYPTALPDNFNKYLQENRVA
CEMGLYYALHIAKQRNKNALQRLLPALVETYNDMASGDIFLHLLTAHLTLLSDEFGNEEF
CSAVFDGFLLNSFSSKDNVHRHNLRLLLHLHQKVLPSCVETLVKTLEPSKQSSDQVKELY
TRLTEKLEAQKKSPPQPDEAPSLDLHPVTVPTTASTPTTSL
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgtttgcgggcctgcctgagcttgggatatctaatggcgaggatctaaaagaaacactg
accaactgcacagagcctctgaaagccattgaccagtttcagacagaaaatggcattttg
ttaccaactcttcagtcagctcttcccttcctggaccttcacggaactcctcggttggag
tttcaccagtctgtctttgacgagcttcgtgacaagttgatggagcgagtcgccactatc
gcggagggcaaggatgaggaccgttatggtaaacttaaagagctgctggagaagagcttt
ccgctggtgaagatgccttccattcagccagtggtcatgcaggtgctgaagcatcttcca
aaggtaccagagaaaaagctgaagcttgtgatggctgataaggaactgtataaggtctgt
gctgttgaggtgaagaggcagatctggcaggaaaaccaggctctcttcggagatgaggtc
tcgcccttgctcaagcagtatatcgtggcaaaggaggcagcacttttcagcagcgatctc
tctattctgcacaacttcttcagcccctcccccaaagcaagacgccaaggagaggtagtc
ttgaaactgacccagatgattgggaagaatgtgaaactatatgacatggtgctccagttt
ctgcgaacacttttcctgcgtactcgtaatgtccactactgcaccctgcgtgcagagctg
ctcatgtccctccatgacctggacatcagtgagatctgctcagtagactcctgccacaag
ttcacctggtgcttagatgcctgtatccgtgagaagtttgtggatgccaagcgagcccgg
gagttgcaaggttttctggatggagtgaagaaaggacaggaggaagtacttggggacctg
tccatgatactgtgtgacccattttccagtaacaccctggttttgagtacggtccgaaac
ctgcaagaattgctaagccaggatgctctacccagagacagtccagacctgatgctgtta
ctcagaatgctgtctcttggacaaggtgcttgggatatgattgacagccaggtctttaaa
gagcctcgattggaactggaagttgtgacccgttttctcccagccatgttgtcagtactt
gtggacgactataccttcactgtagaacagaaactcccttgtgaggagaagacctccctc
tcctaccccacagccttgcctgataacttcaacaagtacctgcaggagaacagggtggct
tgtgagatgggtctgtactacgcactccacattgccaagcagaggaacaagaatgcctta
caaaggttacttcccgcattggtggagacctacaacgacatggcctctggggacatcttc
ctgcacctcctgacagcacacctcaccttgctctctgatgagtttgggaatgaagagttc
tgctctgctgtgtttgatggcttcctcctcaactctttctccagtaaagacaatgtccac
agacacaacctacgcctgttgcttcaccttcaccagaaagtgctgccatcttgtgtggag
accttagtgaaaaccctggaaccctcaaaacagagcagtgaccaggtaaaggagctgtac
accaggctgacagagaaactggaggcccaaaagaagagtcctccccagccagacgaagcc
ccctccctggacctccaccctgttacagtgcccactacagcttccactccaacaacgtcg
ctctga

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