Oncorhynchus kisutch (coho salmon): 109877903
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Entry
109877903 CDS
T09179
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109877903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109877903
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109877903
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
109877903
RAVE complex
109877903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
109877903
NCBI-ProteinID:
XP_031668203
Ensembl:
ENSOKIG00005036128
LinkDB
All DBs
Position
Unknown
AA seq
3113 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPFATNPNKRHKQLNYQWRKTGQFFLNAITYNLAWDP
QGNRILAATEHLQLWAPPSADTLIEEEEGPVTDDKPHPALNDWKCVWQCKTAMSVHITKW
SPDGEYFATAGKDDCLLKVWYPTTGWRSAVVLPDLPDKKGPQVHFSFIYLAHPRSVTGLS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETVLPEDSILGGQITENTYSSSLPGLGGKD
KIQHALESMSHLKHLRRGRRRSSALVSHTELLPSQMGTHETHTHRHISHHANALCHFHIS
ASINPATDIPAVLAESAVFTPEDGSGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKLSEQQ
LDQATDDALDQNGSPIKFDFDLDEMSEKGSSEHEEGEGGEGSTKASSPGSSSSVPLPSML
LERKMEALTLEWNKSPDMLFTIHPTDGSFLVWHVKYLDEYIQGIFRQVQVSFSSRIPVAF
PTGDANSLSKNILMYACSFSNVDSSNAGGEQGTRARRLPRSASAGLGSSALSLSLGQAPG
IGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHTFRYCGHRFHLNDQACHTVLPLL
LTSSHHNALLTPPSAPGSIDLDQPPTHTPPPRGRRRKQLRNAATRTFHDPNAIYSELILW
RVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVASDGK
NLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSTTQ
LLHVFQEDFILGYTPQEDPELYTTSYPSLEEYHPTPFSEKFFLVVIEKDLNMNSVLQMWH
LHLQSVQACVDDPVPERSYQSQLTIPFQQSTADTSPSPLPRSASTANLQSASKLILSSKL
VCSHRLDLPVGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCSVEGGET
TLGCEEGENRIYHWEPWALLNEEEDNNSAVCVPGRPVAVSCSYTGRLAVSFKQPRPGHIP
GQGHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNLFVYSR
SDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTSSKDGV
AIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVY
AQWRQDRKPGEAEGDSLSSEDNIAGGVGGGGGQTATNATTGGSSLAFKGRPRSKSVFEGN
VAIDEALQAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCI
AGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIVAGRDGGRDYTEINSIPPLPLYAL
LSADLDTSYKGGEEGAKGGKVSEVEGARKTGGDQYTDLFQLQAVTTDDFVSFATEKVEKK
SRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRLEQMFLVALADTVATTSSEVSSST
DKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEE
MLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMVEKVGKAAFQRNNDPLDAALFYLA
MKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAG
SLKDAIEVCLEKMEDIQLAMVVARLYEADYESSSTCQAILYEKVLGCQRDGSGYHCTKLH
PDPFLRSIAFWIMKDYTKALDTLLECIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLII
RRHYASPEGAVTSSLGLTSEKSSVDEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPK
VTKKSVSSSPLSKGSSMANVSSSLTLENGNQGALDWASPAPVKANPAWGTEESSATLDWS
QPLVKVEDDGLQLDWGDDKNDEDDTDGGLTMKKTDVETKADEGSGGVRPPGLQREDSQNH
LCSQGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYSWLEKEIGAMHR
ICNYKVTGKEESQELERWDDGGVEDVFEESLGGGGGTEAGAYERHQLGRRRLAAKQLHAE
RRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQESQQETTVKQLQSPLPLP
TTLPLLSASIATTKTVISNPVLHLSNHIHDILHTITQMELPPHPDLMDDRVNLLHTLAAS
LSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERRRLRTESIEEHATPTSAPAQWPG
VSSLIALVQSAQGEDQPKLNVLLCEAVVAVYLSLLIHGLGMHAGNELFRLAAHPLSNKMW
AAVFGGGAKIIIKPKRNVEITPAAAAGKARTDSSSSVTPEPDSGTKSKPAVPAPPPAEDV
DRLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYREKFIPPELSMWDYFVAKPFLPLSD
SGALYDSDESGEEDDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLP
LTGLDFTDLPVTSPLGNAVLKTLENWETQLQERMNKFDGPPPNYINTYPTDLSTGGGPAI
LRHKAMLEPDNTPFKNKNHISFPARRLWHYLVKQEVLQETLIRYIFTKKRKQSECVEGYM
DLLSPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDIIMAFAINRANTNEIVLASTHDVQ
EVDVSTLLAAQPYTWIGEDFDKESHSSDDVDYRSSHTNVAQASSTPSHFNPKDMAASASM
PWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMTGAQDGSVRMFEWNRPQQLICFRQ
AGNARVTRLYFNSQGNKCGVSDGEGFLSLWQVNQTSSNPKPYVSWQCHSKTCGDFAFITS
SSLIATAGQSNDSRNVCLWDTLISPSNAMVHAFPCHENGATVLQYAPKQQLLISGGRKGF
VCVFDIRQRQLLHTFQAHDSAVKALALDTSEDFFVTGSAEGNMKVWKLAGHGLMHSFSTE
HAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSIFDIL
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctaacgggagctgtgaaccccggtgactgctgctattctgtg
gggagcgtcaacgacattcctttcacggcctatggttcaggctgtgatatagtgatcttg
gccagtgattttgagtgtgttcagatcatccctggggctcaaaatggcaacatccaggtg
ggctgtgtcgagtgctcccaccaactgggcaggattgcagcgtcctatgggaacacagtg
tgtatctttgaaccattcgctaccaacccaaacaaacgccacaagcagcttaactaccag
tggagaaagacaggacagttcttcctaaatgctatcacctataacctggcctgggaccca
caagggaaccgtattctggcagctacagagcacctgcagctgtgggcccctccgtcagca
gacacactgatagaggaggaggaaggacccgtgaccgatgacaaacctcaccctgccctc
aacgactggaagtgtgtttggcagtgcaagactgctatgtctgttcacatcaccaagtgg
tctcctgatggggaatactttgcaacagccggcaaggatgactgtctgttgaaggtgtgg
taccccaccactgggtggcgctctgctgtggtgctcccagacctcccagataagaaaggc
cctcaggtccacttctcctttatatacctggcccacccccgctctgtcaccggcctgtct
tggaggaagaccagcaaatacatgcccaagggtagtgtgtgtaatgtgttgttgacgtcg
tgtgaggacggtgtgtgtaggttgtggtctgagacggtgctgccagaggacagtatcctg
ggtggtcagatcactgagaacacatacagctccagcctgccaggcctggggggcaaggac
aagatacaacacgccctggagtcgatgagccacctgaagcacctgcgtcgtggtcgtcgg
aggtcgtctgctctggtgtctcacactgagttgctgccgtctcagatggggacccacgag
acacacacacaccgccacatctctcaccacgctaacgctctctgtcatttccacatctct
gccagcatcaaccctgccacggacatcccagcggtgctagcggagtctgctgtgtttact
ccggaggacgggagtggaggaggagggtttgtggtccactggctcaacaacaaggacctg
tccttcaccacctccatggacctgttcatgctgcagctccgcaagctctcagaacagcag
ctggaccaagccaccgacgacgccctcgaccagaatggctcccccattaagtttgacttt
gacctagatgagatgtcagagaagggttcatcagagcatgaggagggtgagggtggtgaa
ggcagcaccaaggcgtcgtccccaggctccagtagctcagtgcccctgccctccatgttg
ctggagaggaagatggaggcgttaactctggagtggaataagagtcctgacatgctgttt
accatccaccccaccgacgggtccttcctggtctggcacgtcaaatacctggacgagtac
atccaggggatcttcagacaggtgcaggtgtcgttctcgtcccgtatcccggtggcattc
cctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgctccttctcc
aacgtggatagctccaacgccgggggagagcaggggacgagggcccgccgtctgccccgt
tctgcctctgctgggctgggttcctcagccctcagcctctctctgggccaagctccaggc
atcggccctgctgtcatgatggtgtccaaacatgtggacgggtctctcaatcagtgggcg
gtgacgttcgctgagcgctcggcgttctccaacgttctaactgtgtctcatacgttccgt
tactgcggtcaccggttccacctcaacgaccaggcgtgtcacaccgtcctccccctactg
ctgacctcctcccaccacaacgctctcctcacccccccctccgcccccggcagcatcgac
ctcgaccagccacccacacacacacctccccccagaggacggcgcaggaagcagctgcgt
aacgcggccaccaggacgttccatgacccgaacgccatctacagtgagctgattctgtgg
agggtggaccacataggacccctgtcctgcactggaggagtgtcagagctggcccgaatc
aactccctgcacacatcagccttctccaatgtagcatggctgcctacccttgtacccagc
tctgtgctaggtacatactgtaacagttccagtgcgtgcttcgtagcgtcagatggtaag
aacttgcgtctctaccaggctgtggtggacgccaggaaactactggacgaactgtcagac
cctgagacctcaaaactagtaggagaggtatttaacatagtgagccagcagtcgacagcc
agaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatctaccacccag
ctccttcatgttttccaggaggactttattttggggtatacacctcaggaggacccagag
ctctacactacatcctacccttctctcgaggagtaccatcctactccgttctctgagaag
ttcttcctggttgtcatagagaaggacctgaacatgaactctgtgctgcagatgtggcac
ctgcacctccagtccgtacaggcctgtgtggatgatccggtcccagagcggtcttaccag
tctcagctgacgatcccgttccaacagagtacagctgacacgtccccctcccctctccct
cgctcagcctccacagccaacctgcagtcagccagcaaactgatcctcagctccaagctg
gtctgtagccaccgcctggacctgcctgttggggtggaggtgaccagggctacgccctcc
gcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggccccctacctgatcgtc
accacctgctctgactcccgcgtccgtttctggcgctgttctgtggaggggggagagaca
accctgggctgtgaggagggggagaacaggatctatcactgggagccttgggctctactc
aacgaggaggaggataacaacagtgctgtgtgtgtcccgggacgtcctgtagccgtgtcc
tgttcctacactggacgactggctgtctccttcaaacagccccggcctggacacatcccg
ggacagggccatggtccagcaggggacttctccatgcacgtgtccatctttgagtgtgag
tctacgggggggtctgagtgggtgttggagcagactctccatctggatgacttcactagg
ccctcctctactctggaccccagagtcagtgtagactccaacctctttgtgtacagcagg
tctgacctgtacatgagtcgcgaccaccactctcccaacatcaaacactatgtccacctg
gactggctgtccaaagaggatgggtctcatatcctcacggtgggggtgggatccaatatc
ctcatgtacggtcgcatctcgggcgttgtcaacgaacagacttcaagcaaggacggggtg
gcgatcatcaccctacctctagggggcagcatcaaacagggtatccgttcacgctggatc
ctgctgcgcactgtggacctgctctcctctgtagacggcaccccctccctgcccgtgtcc
ctgtcctgggtgagggacggcatcctggtggtgggtatggactgtgagatgcacgtgtac
gcccagtggcgccaggaccgcaagcccggcgaggccgagggggacagcctctcctctgaa
gataacatcgccgggggggttggagggggcggagggcagacggccaccaatgcaaccacg
gggggatcctcgttggcgttcaaggggcgcccccggtccaagagtgtgtttgagggcaac
gtggcaatcgacgaggctctccaggcgccggcagggctgcaggaggggggtctgttcgag
gcagcccactccctgtcccccaccctgcctcagtaccatccaacacagctgctggagctc
atggacctggggaaggtccgccgcgccaaggccatcctgtcccacctggtgaaatgtatc
gctggggaggttgctgtggtgagggacgtggaggcaggtgagggtggaaccagacgccac
ctgtcccggacaatcagtgtgagcggcagtacggctaaagacaccatcgtggccggccgc
gacgggggacgagattacacagaaatcaactccattccccctctacccctctacgctctg
ctctctgctgacctggacacctcctataagggaggagaggagggggcgaagggaggcaag
gtgtctgaggtagagggggcgaggaagacaggaggagatcagtacacagacctgttccag
ttgcaggctgtgacgacggatgactttgtgagcttcgctacagagaaagtagagaagaag
tctagattcatcaacctgtctcagtacggacccacctacttcggaccagaacacgcacag
gtgttatctagtcagctgatgcattccagtcttccaggtctgaccaggttggaacagatg
tttctggtggctctagctgatactgtagctaccaccagttcagaggtcagcagctccact
gacaaacagtacacaggtggtgaggccctggatgagtgtgggttgaggtacctgttagcc
atgcgtctacacacctgtctcctcacctctctacccccactgtaccgcatgcagttgctg
caccaaggtctgtctacgtgtcactttgcgtgggcgttccactcggaggctgaggaggag
atgttgaatatgatcccggccatgcagagaggagaccctcagtggtctgagctacgggct
gtaggggtgggctggtggatacgcaacatcaacacactacgcaggatggtggagaaggtg
ggtaaagcagcgttccagaggaacaacgatcctttagatgcagctctgttctacctggcc
atgaagaagaaggctgttctctggggcctgttcaggtctcagcgtgatgagaagatgacg
gtgttctttaagaataacttcagtgaggaccgctggcgtaaagcagctctgaagaacgct
ttctctctgctggggaaacagcgctttgaacaggctgctgccttcttcctgctggctggc
tccctgaaagacgccatcgaggtgtgcttggagaagatggaagatatccagttggccatg
gtagtagccaggctgtacgaggctgactatgagagcagttccacctgccaagccatcctg
tatgagaaggttttgggctgccagagggacgggtcagggtaccactgcaccaaactacac
ccggacccattcctacgcagcatagccttctggatcatgaaggactacaccaaggctctg
gacacactgctagagtgcatccccaaagaggatgatgagaacccagatgtgatggtgaag
tcgtgtaacccagtggtatttagtttctataactacctgaggacacaccccctgatcatc
cgccgtcactatgcgtcccctgagggtgctgtgacatcatcactaggcctcacctcggag
aagagcagcgtcgacgagatcaacctcatcgaacgcaaactcttcttcaccaccgccaac
gcacacttcaaggtgggctgtccagtgcttgccctggaggtgctctctaagatccccaag
gtgaccaagaagtcagtctcctcgtcccccctaagtaaaggctcttccatggccaacgtc
agctctagcctgaccctggagaatgggaaccagggggccctggactgggcctctcctgcc
ccagttaaggccaatcctgcctggggtacagaggagagctcagccacactggactggagc
cagcctctggtcaaagtggaggacgatggactccagctggactggggagatgataagaac
gatgaagatgatactgatggtggtctgacaatgaagaagactgatgtggagaccaaagct
gacgaggggtctgggggggtgagaccacctgggctgcagagagaggactctcagaaccat
ctctgctctcagggtgagtctgaggtggacgtgatcgcagagcagctgaagttcagagcg
tgtctgaagatactgatgacagagctcaggacgttagctacgggctatgaggtggacgga
gggaagctgcgctttcagctttacagctggttagagaaggagataggggccatgcaccgc
atctgcaactacaaggtgacggggaaggaggagagccaggagctggagagatgggatgat
ggaggagtagaggacgtgtttgaggagtccctggggggtggcgggggtacggaggcgggg
gcgtatgagcgccaccagctggggcgtaggcgtctcgcagccaagcagcttcatgctgag
aggaggaaggcgtggctgaggaagaaccaggctctgctccgagtcttcctgtcctactgc
agcctgcacggagccaagggagggggggtcacctcagtacgcatggagctcatcttcctg
ctgcaagagagccaacaggagactacagtgaaacagctccagtcccccctgcccctcccc
accaccctccccctcctctcagccagtatcgccaccaccaagacagtgatctccaaccct
gtcctccaccttagcaaccacatccatgacatccttcacaccatcacacagatggagttg
cctccacaccctgacctcatggacgacagggtgaatctcctgcacaccctggctgcctct
ctgtctgcctgcatctatcaagccctgtgtgacagccatagctacagcagccaggcagag
gccaatcagtttacagggatggtgtaccagggcctgctgctgagtgagaggagacggtta
cgcaccgagagcatcgaggagcatgctacacccacctctgcccccgcgcagtggccaggt
gtgtcctctctgattgctctggttcagtcagctcagggcgaggatcagcccaagctcaac
gtgttgctgtgtgaggctgtggtggcagtttacctgtccctgctcatccacgggttgggc
atgcacgctggcaacgaactattccgcctcgctgctcaccccctcagcaacaagatgtgg
gcggccgtgtttgggggtggggctaaaatcatcatcaaaccgaaacggaacgtcgagatc
actccagcagcagcagcaggtaaagctagaacggactcgtcatcatcagtgacccctgaa
cctgactcagggactaagtctaaaccagccgtgccagcccctcccccggcagaggatgtg
gatcgactcagacgacggtttaatatgaggatgctggttcctggtcgtccagtaaaggag
gtccctgccacaccccctcccgtccctgcagagagacccgcctacagggagaagttcatt
cctccagagctcagcatgtgggactactttgtggccaaacccttcctgcccctgtcagac
agtggagctctgtatgactcagatgagagcggagaggaggatgacgacgacgatgatgat
gatgctttcctctctgacacacagatgactgaacactctgaccccaactcatacagttgg
tctctgatccgtctggtcatggtgaaactggctctacataacgtcaagaccttcctccct
ctcactggactggacttcacagacctgccggtgacgtctcctctggggaatgctgtgctg
aagacactagagaactgggagacccaactccaggagaggatgaacaagtttgatggtcct
cctcccaactacatcaacacctaccccactgacctcagcacaggaggggggcccgccata
ctgaggcacaaggccatgctggagcctgacaacacacctttcaagaataagaaccacatt
tcgttccctgcgaggcgtctctggcactacctggtgaaacaggaagttcttcaggagact
ttgattcgctatatcttcactaagaagaggaagcagagcgagtgtgttgaaggctatatg
gatctcctcagcccaaactgtgtatctggagctctcaggtccaacaaggtggagggagac
ttaggctacccaggaaggaatgctaagatcatccacaaggagtctgacatcatcatggcc
ttcgccatcaacagggctaacaccaatgagatagtgctggcgtccactcacgacgtgcag
gaggttgatgtgtccactctgttagctgctcagccctacacctggataggagaggacttt
gacaaggagtcacacagttctgatgacgtggactaccgttcttcccacactaacgttgcc
caggcctcctctaccccgtcccacttcaaccccaaagacatggcagcctctgcatccatg
ccctggctggggagtgggcagaccagcatgggtgctagtgtgattatgaagaggaacctg
aacaatgtgaagagaatgacctcccaccccatattccagtactatatgactggggctcag
gacggcagtgtccgtatgtttgagtggaacaggccacagcaactcatctgcttcagacag
gcaggcaatgccagagtcacacgcctctacttcaactcacagggaaacaagtgtggtgta
tcagatggagaaggcttcctcagtctgtggcaggtcaaccagacctcctccaaccccaag
ccctacgtgagttggcagtgccactctaagacctgtggtgattttgccttcatcacttcc
tccagtctcatcgcaacggcaggacagtccaacgacagcagaaatgtctgcctgtgggac
actcttatttcacctagtaacgccatggtacatgccttcccgtgccatgagaacggtgcc
acggtgttgcagtacgctcccaagcagcagctgctgatctcgggaggcaggaagggcttt
gtgtgtgtgtttgacatccgacagagacagctgctacacaccttccaggcccacgactca
gccgtcaaagccctggcgctcgacacctccgaagacttcttcgtaaccggctcggctgag
gggaacatgaaggtgtggaagctggcaggccatggcctcatgcactcgtttagcacagag
catgccaagcagtccatcttccggaacatcggagcaggcgtcatgcaggtggagacccgc
cccggcaaccgcatattcacctgcggcgccgacggaaccctcaagatgagggttctaccc
gaccgatacaacatcccctctagcatcttcgacattctgtag
DBGET
integrated database retrieval system
