Oncorhynchus kisutch (coho salmon): 109877905
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Entry
109877905 CDS
T09179
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109877905 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109877905 (nhej1)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109877905 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
109877905
NCBI-ProteinID:
XP_031669196
Ensembl:
ENSOKIG00005043931
UniProt:
A0A8C7KB84
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MERDAVDGVLLDCPWVPVCISGSQLLAKTWFGDTAYRILLTDLHSVWEEEMDTRAIQDRA
QELNRRLRAPVHAFFSHMCEVAQPCLSGRVEDGGALQFSLNHHGGDINLKLKSELAGVPF
YWEFRCTPAPVALVCSQLVRPLLLMSRLLQRQVGQLGALLARKDTELQDYRDNGAVLSRG
RLYMQRNKNTLIKHNIHTCSSRWCVCFAERLQTELFEEQNYRENFLTQTVPQVCARQGGL
GFDSELQELYSAVTSYGNTNARKRKISERHAPEEDESTTGDRDPNHSASGTQPPGEEVNH
GLDQGDKRQTGRGDRARTTDSETPNEEKTTVPMATAADRPSARPKKKKAKGLFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatgcagttgatggggttctgctagactgtccctgggtaccagtgtgtatc
agtgggtctcagctcctggcaaagacctggtttggggacacagcgtaccgcatcctgctc
acggacctgcactctgtgtgggaggaggagatggacaccagggccatccaggacagagct
caggagctgaacaggcgattgcgggctcccgtccacgccttcttctctcacatgtgtgag
gtggctcaaccctgtctgtctggacgggtggaggacgggggggcgcttcagttctccctc
aaccaccacggcggtgacatcaacctgaagttgaagagtgagctggctggggtgcctttc
tactgggaattccgctgcacccctgcccctgtggctttggtgtgcagtcagcttgtgcgc
cccctgctgttgatgagcaggttactgcagagacaggtgggccaactgggagctctgctg
gccagaaaagacactgagctccaagactacagggacaatggggcagtgctgagcagaggt
aggctctacatgcagagaaacaaaaatacactaattaaacacaacatacacacctgttcc
tctcgttggtgtgtgtgttttgcagagcgattgcagacagagttgtttgaggaacaaaac
tacagagagaacttcctgacacagactgtgccacaggtatgtgcgaggcagggcggtctg
gggtttgactctgagctgcaggagctctactcagccgtcacgtcctacggcaacaccaac
gctcgcaaacgtaagatctctgagagacacgcccccgaagaggacgaatccaccacaggg
gaccgtgaccctaaccactccgccagcggcacacagcccccaggagaggaggtgaaccat
gggctggaccagggggataagaggcagactggacggggagaccgagccagaaccacagac
tcagagacacctaatgaggaaaagactacagttcccatggctactgccgcagatcggccc
tccgcccgacccaagaagaagaaagctaaggggctttttggatga
DBGET
integrated database retrieval system
