KEGG   Oncorhynchus kisutch (coho salmon): 109877937
Entry
109877937         CDS       T09179                                 
Name
(RefSeq) AF4/FMR2 family member 1-like isoform X3
  KO
K15184  AF4/FMR2 family member 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109877937
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109877937
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 109877937
NCBI-ProteinID: XP_020325759
LinkDB
Position
LG23:7189479..7261440
AA seq 1160 aa
MAARSSHNEERNLLRIREWERRNQEALQEKEFYQENVPLFGEPYKTNKGDELSSRIQRML
GSYEDVNISNSHLCLDSSFSNDPPSHVTTTYRRPSHSRDRVKPAFQNTPLYGAGQNGSGG
PSISRQTSQPLKRLPVPSSHTQSSLGLSQGQASPDPLQGKAEPCPWPDLRECASLTPVLS
TLSPPAEPLSPLHSSDSEPQDTPDRHQGSPLHPDSPVPMEGSPLDDPQRDIPLLAIEGAT
TLPSQTFPLPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPSPEGFHGQSYHEPLP
DLKSTKPSLSKLKIPSQSIETLSNKAHCVEDILREMTHSWPPLLTAIHTPSTAELSKFSF
PVKEAQHVPPAFPGQKHYGSPPLASSSRLICQQSSSSFSTVVATHSSGVESASSSDSESS
SGSDSDSESSESGTEEAPQPIRSSSPPVPKAEGPVVTNWQLNNWIRVSQQNPITESHSDT
VQSPLPKQQQSHDSEEEAIPPRDYKSHTPPQYPEFSDSEAKPPGSEDIACKQHVRNKSLA
VSHVGDSSSQRKTVGNKHPSRPVKAPRPEDSQAGLRVESVEVAPRDKDPSFTDRPKVKTK
TGHSSKSGSAITGSKKPAKRNSLEKRKTKQPESGSSGPKMTLMLDCKRERSRSPSPARVV
ETSVSVRKETVPAPQKGQKTPRSNSAAAAHQAKRESSANASRAPKGPPHALLVKIELNLL
SRVPPQGTRPSHGGQEPTSRKRPNIAPERGDGDPASPITTKVCKKRPAEKDAKSLPRKKP
KLEKDPKHSSSCPGSGKSATPKNPGEEEVERKRSKKGASVPLQDPGKEPGRRKRHAGETP
EPNAASAAKSKDREASTPVKHKKGTGKRHTEHSKTGKAPKSSFAFSVPAQLTGGSLSSRP
LLKVEDRQHPVEYHMKEAKKLKHKADATSDKVGKAFNYLDAAMSFVESGIAMETDPQTPK
SAYTMFAETLDLIRFILKLKGSMDPSAPVTDKDFTILCMRCQSLLQMAMFRYKRETALKY
SRTLTDHFKSSSKSAAPSQCVSKSTGTPSPMSPMPSPASTASSGPGSNHSSGVGMGNVST
VAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHRGSGLLSELDSALGQLSLTSTMSS
LVRHTRQGLQWLRLDTCETQ
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggcagctcgctcaagccacaatgaagagcggaatctccttcgcatccgagagtgggag
aggcggaaccaggaagccctccaggagaaggagttctaccaggagaacgttccccttttt
ggggaaccctacaagacaaacaaaggagatgagctttccagccgtatacagaggatgctg
ggtagttatgaagatgtgaacatctccaactctcatctgtgtttggacagtagcttctct
aatgaccccccatctcacgtcaccacaacatataggcggccatctcacagccgagacaga
gtgaagcctgcattccagaacactcctctgtacggggcaggccagaatggtagtggtggt
ccctccattagcaggcaaacttctcagcctctgaagaggctccctgttccctcctcccac
acccagtcctcactgggtctcagtcaaggccaggccagccctgatcccctccaggggaaa
gctgaaccctgcccctggccagacctgagggagtgtgccagtcttactccggtcctctcc
accctgtcccccccagctgaacccctatcccccctacattccagtgactctgagccccag
gacacccctgacaggcaccaaggatcccccctgcatcctgactcccctgtcccaatggag
gggtcccctctggatgacccccagagagacatcccacttctggccatcgagggagcaaca
accctgccctctcagacattccctctaccactggcctctaaaccaaatctggtcatgccc
cagaagcccacagcctacgtccggcccatggacggccaggaccaggtgaccagcgagtct
ccggatctcaagccctctcctgaaggcttccatggacagtcttatcatgaacccttacca
gacttgaaaagcaccaagcccagcctttccaaactgaagattccatcacagtctatagag
actctgtcaaataaagctcactgtgtggaggacattctgagggaaatgacccactcctgg
cctcctctcctgactgccatccacacacccagcacagctgagctctccaagttctccttc
ccagtcaaggaagcacagcatgtcccacctgcatttccaggacaaaaacactatggatca
cctccactagcctcttcctccagactcatctgtcaacagagctcttcgtccttcagtaca
gttgtagcaacacattccagtggggtggagtcagccagctccagtgactccgagagcagc
tcagggtcagactcagacagtgagagcagtgagagtgggacagaggaggccccacaaccc
atcaggagcagcagcccaccagtacccaaggctgaaggccccgtggtgactaactggcag
ctgaataactggatcagagtgagccagcagaaccccatcacagagagccatagtgacact
gtccaaagccctttaccgaaacagcagcagagccatgactcagaggaggaggccattcct
cccagggactacaaatcccacacaccaccacaatacccagagttcagcgatagtgaagcc
aaacctccaggaagtgaggacattgcctgcaaacagcatgtccgcaacaagtccctggcc
gtctcacatgttggggacagcagcagccagagaaaaactgtggggaacaaacatccctcc
agaccagttaaggctccccgtcctgaggactcccaggctgggctgcgggtggagagtgtg
gaggtggccccccgcgacaaagacccctcgttcacagacaggccaaaggtcaaaacgaaa
accgggcacagcagcaagagtggcagcgccataacgggcagtaagaagccggccaagcgc
aactctttggagaagaggaagactaaacaaccagagtctggaagcagtggtcccaagatg
actctgatgctggactgtaagagggagaggtctcgcagtcccagccctgcccgggtggtg
gaaacctccgtcagtgtcaggaaagagaccgtcccggcccctcagaagggccagaaaaca
cccaggagcaactctgcagctgcagcacaccaggccaaacgggagtcctcagccaacgct
tccagggcccccaagggacctccacatgccctgctggtgaagattgagctcaatctgctg
tccagggtccctccccagggcaccaggccttctcatggaggccaggaaccaaccagcagg
aagagacccaacatagccccagagaggggagacggggaccctgcttcccccatcactacc
aaagtctgcaaaaagagaccggctgagaaggatgcgaaatccctgccaaggaagaagcca
aaactggagaaagatcccaaacactcctcttcatgtcctggttctggcaagtctgcgacg
cccaagaaccctggagaggaggaggtagagaggaagcggtcgaagaagggggcttctgtc
cctctgcaagaccctgggaaagagccggggaggcgcaagcggcatgcaggggagacccca
gagcccaacgctgcctcagcagccaaaagcaaggacagggaggcctccacccccgtcaaa
cacaagaagggcactgggaaacgacacacagagcattccaagactggcaaggcccccaag
agcagctttgccttctctgtacctgcccagctcaccgggggttccctgtcctccagaccc
ctgctcaaggtcgaggacaggcagcacccagtggagtatcatatgaaggaagccaaaaaa
ctcaagcacaaagcagatgccacgtctgataaggtgggcaaagctttcaactacctcgat
gctgccatgtcctttgtggagagcggcatcgctatggaaaccgatccccagaccccgaag
tcggcatatacgatgttcgctgaaaccttggatctgataaggttcatactgaaactgaag
ggttctatggacccctctgcccctgttacagacaaggattttacaatattatgtatgagg
tgccagtcccttctacagatggccatgtttcgctacaaaagagaaacggcacttaagtat
tcaaggaccctcacggatcatttcaagagctcctccaagtctgcagccccctcccaatgt
gtctcaaaaagcacgggcacaccatcccccatgtctcccatgccgtctcctgccagcaca
gccagctctgggccaggctccaatcacagcagtggggtggggatgggcaatgtgagcact
gtggccattccccaggtcatccagcaggtggcatcgtcctacgtcaacatcacagcactc
ttcctgagtgctcacgacatctgggagcaggctgacgagctggcacacagaggcagtggt
ttgttgtctgagctggactcagctctgggccagttgagcctgacctccaccatgagctct
ctggtgcgtcacacacggcagggactgcagtggctccgactggacacctgcgagacacag
tga

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