Oncorhynchus kisutch (coho salmon): 109877974
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Entry
109877974 CDS
T09179
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109877974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109877974
03016 Transfer RNA biogenesis [BR:
oki03016
]
109877974
03012 Translation factors [BR:
oki03012
]
109877974
04131 Membrane trafficking [BR:
oki04131
]
109877974
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109877974
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109877974
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109877974
Translation factors [BR:
oki03012
]
Eukaryotic type
Elongation factors
109877974
Membrane trafficking [BR:
oki04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109877974
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109877974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
109877974
NCBI-ProteinID:
XP_031655735
LinkDB
All DBs
Position
LG20:48098869..48103148
Genome browser
AA seq
439 aa
AA seq
DB search
MGKEKLHINIVVIGLVDSGKSTTTGHLIYKCGGIDKRTIEKLEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRHYHIQQVTIIDPPGHRDFIKNMITGTSQADCTVLSG
RRGRVRGGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKKIGY
NPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSASGTTLLEALDAIQPPSRPAD
KPLRLPLQDVYKIGGIGTVPVGWVETGVIKPGMVLTFAPVNVTTEVKSVEMHHEALTEAM
PGENVGFNVKNVSVKDIQRGNVAGDSKNDPPMEVASFTAQSHIIILNHPGQISAGYAPVL
DCHTAHTACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVAMVPGKPMCVESFSEDPPL
GRWCVCVSALNPDPYWGDR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagcttcacatcaacatcgtggtgatcggccttgtggactcaggcaag
tcgaccaccacaggccacctcatctacaagtgtgggggcatcgacaagaggaccattgag
aagcttgagaaggaggccgctgagatggggaagggctcgttcaagtacgcctgggtgctg
gacaagctgaaggcagagagggagcgaggcatcaccatcgacatctccctgtggaagttt
gagaccagcagacactaccatatccagcaggtcactatcatcgaccccccgggacacagg
gacttcatcaagaacatgatcactggcacctctcaggcagactgtaccgtgctcagcggc
aggcgtgggcgagttcgaggcggacaaacccgtgagcacgcccttctggcctacacccta
ggggtcaagcagctgatcgtaggggtcaacaagatggactccaccgagcccaactacagc
cagaaacgttatgaggagattgtgaaggaagtcagcacctatattaagaagattggttac
aacccggatacagtggccttcgttcccatctccggctggaatggggacaatatgctggag
gctagccctaacatgacatggttcaaagggtggaagatcacccgtaaggacggcagcgcc
tctgggaccaccctgctggaggccctggacgccatccagccgccctcccgccccgctgac
aaacccctccgcctgcccctacaggacgtctacaagatagggggtattggtacggtcccg
gtggggtgggtggagacgggcgtgatcaagccaggcatggtgttgacttttgcccccgtc
aatgtgaccacggaggtcaagtcagtggagatgcaccacgaggcgctgaccgaggccatg
cccggagaaaacgtgggctttaacgtcaagaacgtgtcggtgaaagacatacagcgaggg
aacgtggctggagacagtaagaacgacccgccgatggaggtggccagcttcactgcacag
agtcacatcatcatcctgaaccacccaggtcagatcagtgccggctacgcccccgtgctg
gactgccacacggcccacaccgcctgtaagttcgccgagctgaaggagaagattgaccgg
cgctcgggcaagaagctggaggacaaccccaaggccctgaagtctggcgacgcagccatc
gttgccatggtccccgggaagcccatgtgtgtggagagcttctccgaggacccaccactt
ggtaggtggtgtgtgtgtgtgtctgccctcaacccagatccctattggggggacagatga
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integrated database retrieval system
