Oncorhynchus kisutch (coho salmon): 109878035
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Entry
109878035 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109878035
04120 Ubiquitin mediated proteolysis
109878035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109878035
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109878035
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109878035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109878035
NCBI-ProteinID:
XP_031645429
Ensembl:
ENSOKIG00005041100
UniProt:
A0A8C7K9P7
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Position
LG15:complement(8593688..8606460)
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AA seq
620 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVFTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPVNAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGATETPGATEAAQTQGAGTT
GASTVGAAPAPGGPMPGFPFHSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAAGEASG
SSPPSTSAETQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQGDGEEVGEDGEPNP
SELRRRRLRKLETTPPPPDH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagcgctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcgggcagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacatgtctggcctttaccgtgttcagggatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatgttgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacgatggtgttcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtatatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagctgttacg
gacgcaataatgtcacggcgagctatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtatgtatcatctgtcgtgaagagatggtgact
ggagccaagaaacttccttgcaaccatatcttccacgcaagttgccttcgctcctggttt
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgccccggcagcacctgtcaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctgggggcccttccctggagcggccccccctgctggtgctgctggagcccca
ggggccacagagaccccaggggccacagaggcagctcagactcagggagctggcaccact
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttt
cactccttcccacccccaccattcccctcagctccatggctgactatgccaccaccacct
ccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtcagaggct
gagctgagggagctggagcaggagggccgtagaggcctggaggccagactgcagtgtctc
cacaacatccacactctactggacgctgccatgctcaacatcgaccaatacctcactacc
gtcgccacactcattcctcctcagtcagaaaccagcagcgcggctggagaggccagcgga
tcatctcctccgtccactagtgcagaaacccaggagaacgactctcagagcagtacagcc
gctgaacctgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttg
ggtgacagtgaagaccagggggatggagaggaagtcggggaagacggagagcccaaccct
tcagagctgaggcgccgtcgtctccgcaaactcgagaccacaccccctcctcctgaccac
taa
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