Oncorhynchus kisutch (coho salmon): 109878084
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Entry
109878084 CDS
T09179
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109878084
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109878084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
ig
LRR_9
Ig_2
fn3
Sp38
DHU1_N
Motif
Other DBs
NCBI-GeneID:
109878084
NCBI-ProteinID:
XP_020325902
Ensembl:
ENSOKIG00005038917
LinkDB
All DBs
Position
LG21:complement(30097044..30126302)
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AA seq
773 aa
AA seq
DB search
METLLVYLMVLGMAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPDIDRHTVEMR
LGDNFVTSIKRRDFANMTKLQDMTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLQHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMTSLHTLG
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSLGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFIC
VASNPAGESQQTVDLVIAKLPHITNSTVEKEQDPGSSDIATVTRTGGGGEGGGVVPLGNT
KTSQEKKVVIAEATSTSALVRFSFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTDPQYLRCHFMQSQFLGGTIVVMI
GGIIVASVLAFIVFLIVRYRVCNQSDEDKALEMGEIRSLSSDGQLQGCGIPKSMSKSLSK
QILCLEKPEKVDKEYLRVGLPPPELFKQQRPPVLTTTTSTKPSIPDCQTNVELENTNRNN
SAEAKMVVSAVSTKWTKVTRGPSPPGGSSHHYMTVPAGGVRVNRRHSLNMDSYKECCYFS
LIQQQQPKPGRGLRSKRSLSMSGELPQLESAMANIHRSRDKLYGSEWLLESTL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgttagtttacctgatggtacttggcatggctgtaaaagcccacaaggtc
caggtgtgcccaaaacgctgtgtctgccagatgcttaaccccaacctagcaaccctctgc
gacaagaagggtctcctcttcgtcccgcccgacatcgaccgtcacaccgtggagatgcgt
ctgggcgacaacttcgttacgagcatcaaacgacgggacttcgccaacatgaccaaactg
caagacatgacgttgtctcggaacaccattggctccatctcgcctcacgcctttaaagat
ctggagaacctcagagccttgcatctggacagcaaccgtctgacgaggctcaccaacgac
accttcagtgggatgtccaagctccaacatctcattctcaacaacaatcagctgattcac
atccacatcggggccttcaatgatctcacagctctagaggagttagatctgtcctacaac
aacttagaaagcgccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacattcctgagggaaccttctctggcctgcagaagctc
aaacgccttgacgtcacatccaacaagctccagaagcttccgccagacccagtgttccaa
cgggccggcgtcttggccacatcagggagcttgggtccgacatcatttgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggagggag
gatgatctggagacatgtgcggctccgcagcacctggctgggcgatacttctggaccgtg
tctgaagaagagttcctctgtgagccccctcttatcaccagacactcccaggagctgcga
gcattggagggtcagagtgtagctctgcgctgtaaggccaggggcgacccagaccccatc
atccactggatcgccccagacggccggctcatgtccaactcctcccgggctgcggtgcac
agtgatgggaccctggacattcttatcagcactgtgaaggactcaggctccttcatctgt
gttgcctccaacccggccggggagtcccaacaaactgttgacctggtgatcgccaaactc
ccacacatcaccaacagtactgtggagaaggaacaggatccaggttcttctgatatcgcc
acggtaacgaggacgggtggtggtggggaaggcggaggagtggttccactgggaaacaca
aagacgagccaggagaagaaggtggtgatcgctgaggccacgtctacctcggccctggtc
aggttcagcttccaaagaagtataccgggcatccgaatgttccagatccaatacaacgga
acctacgatgactctctggtttacagaatgatccctccgagcagtaagagtatcctggtg
aacaacctggctgccggtacacagtacgacctgtgtgtgctggccatctacgacgacctg
gtgacctccctgactgccacgcgggttgtggggtgcgtccgcttcaccaccgatccccag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatgatc
ggagggatcatcgtggcgtccgtcttagccttcatcgtcttcctcatagtgaggtaccga
gtctgtaaccaaagcgatgaggataaggctttggaaatgggtgagatccggtctctgagc
agtgatggtcagctccagggctgcggcatccccaagtccatgtccaagtctctgtccaag
cagattctctgtctggagaaaccagagaaggtggataaggagtatctgagggtgggcctt
cctccccctgagctgttcaagcagcagcgacccccagtcctgaccaccaccacatccacc
aagccatccattcccgactgccagacaaatgtggagttagagaacacaaaccggaataac
tcagcggaagctaaaatggttgtttccgccgtttccacaaaatggacaaaggtcactaga
gggccaagcccccctggagggtcctcccaccattacatgacagtgccagcagggggcgtg
agggtgaaccggcggcactctctgaacatggactcgtacaaggagtgctgctacttcagc
ctgatacagcagcagcagccaaagcctggtaggggtttgcgctccaaacgcagtctgtcc
atgagtggagaactgccccagttggaaagtgcaatggcaaacatacatagaagcagagac
aagctgtatgggtccgagtggcttctcgaaagcactctatga
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