Oncorhynchus kisutch (coho salmon): 109878088
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Entry
109878088 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109878088
04121 Ubiquitin system [BR:
oki04121
]
109878088
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109878088
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109878088
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109878088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
FAR1_N
zf-C3HC4_3
DUF8608
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
109878088
NCBI-ProteinID:
XP_031693511
Ensembl:
ENSOKIG00005000844
LinkDB
All DBs
Position
LG2:complement(3599461..3609030)
Genome browser
AA seq
325 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGTNGTDDTAT
QFAEQLWHLLFVERPFTVDGDSPESEPRVPGGGVGVGSGGLGLGGLGGLGGLGGGPIGGS
VPAGLGGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFA
NSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTV
NVSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGE
DSNTQNPPESPSLNTDPRTQERWSF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaagag
gtaacagaagattccagtctgctagagggtggcactaacgggacagatgacacagccaca
cagtttgcagagcagctgtggcacctgttgtttgtagagaggcctttcacagtggatggt
gacagtccagagtcagagccccgggtccctggtggaggggttggggtaggatcagggggg
ttaggtctgggggggctgggagggctaggaggcctgggaggaggtcctatcggagggtca
gtccctgctgggctaggaggacccctggggggtcctctgggagggggggaacactggggg
cctggtcgcccccctcgcctacacagtcagcggaggtaccgctccagagggagcagcaga
cctgaccgctcacctgccgtagaggggatagtacaacagtttctggctggtctatttgcc
aactctggagttcctggctcacctcccctctcttggacggggatgctacactctaaccca
ggggactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcag
tttgagaacacgggccctcctcctgcagagaaagagaagatctcctccatacctacagtc
aacgtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggaggacttt
gcagttggagagcccgtcagacagctaccctgcaaccacttcttccactcagactgtata
gtaccctggctggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaa
gacagcaacacccagaaccccccagaatccccctctctaaatacggacccccgcacacag
gagagatggtccttctga
DBGET
integrated database retrieval system
