Oncorhynchus kisutch (coho salmon): 109878090
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Entry
109878090 CDS
T09179
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109878090
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109878090
09142 Cell motility
04820 Cytoskeleton in muscle cells
109878090
04810 Regulation of actin cytoskeleton
109878090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109878090
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109878090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
VWA_2
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
109878090
NCBI-ProteinID:
XP_031693494
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Position
LG2:complement(3616862..3663000)
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AA seq
1170 aa
AA seq
DB search
MELHKYLLLLKFIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRRGDVYKCIVGEERSSNCTKTNLGESTLQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICVSVSNDLEPRETISPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDWEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAKGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSDNGDVNIAQALNGEQ
IGSYYGSEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGEEVFVSNGTLKA
EDRFQDARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRSIVQINMSLSFQPHSIN
VIQKTCQRGGRESACLNATACFLALSRSPGTHSSSFKLSVVAMLDERKLTARALFDDSNQ
RQTQLGVRVHTGQTVCHNLPIHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
SIAFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTS
LTLHYSRNLHISSHSIREDTQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLLSEVQMKLTVASDSVEREATLGDNSVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSKLELRLSLPSVAAGDRVFMAVTEVFSYNVSGVNCSVDS
DVSQQKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDN
FFRQAKFKVVRIVSAYRLAVQEYNLVTLGSGAIWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFAMWKLGFFTRKQIKDEELED
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcacaaatacctgctactcctcaagttcatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggcccta
tttggtttctctgtgctacagcatgacaatgcgggggacaaatcgatgctggttggcgct
ccttgggatggaccttccaataccaggagaggagacgtgtacaaatgcatcgtgggagag
gagaggagctccaactgcaccaaaaccaacctaggtgagagcacattacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ttggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatc
tgtgtttctgtcagcaacgacctggaacctagagagaccatctcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcggctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatatgccatccacatgggctgtacggaggcattcagccctgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggacggagagtcacatgat
tgggaggagctaccggacgctctggaggagtgtgagaagagaaacatcaccagatatgcc
atcgctgtattgggtcactacatccgcaggcagcaggacccagagacgtttatcagtgag
atcaagtacattgccagcgaccctgacgacaaatactttttcaacgtgactgacgaggcg
gcgctcaacgacatcgtagatgcactaggagaccgcatcttcactctagaggggacgctg
gggtacaacgagagctccttcaagtttgagatgtcccagattggcttctccacacacgtt
ctggatgatggcatcctgtttgggatggtgggggcgtatgactgggacggaggggtgctg
aaggagggtgccaagggccgcatcatgcccaccagagaggcctttgagtcagagttcccc
caggagctcaagaaccatgctgcctatctgggctacacagtgtcgtcagtgatagtggga
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtcatt
ctgtttgaactgagcgacaatggagatgtcaacattgcacaggccctcaatggagaacag
attgggtcatactatggcagtgaggtgtgtgggttggacgtggaccaggatggcattact
gatgttctgctggtggcagcacccatgtacctgggccctggcaacaaggaagcaggcaga
gtctacatctactccctcagtggggaggaggtgtttgtgtctaacggtactctgaaggca
gaggataggttccaggatgctaggtttggctacgccctggcctccgccccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctagaagacggacacaatggggcc
atatacgtctaccacggccagggcatacacatcatccacaactacaaacagcgtatcgca
gggtcgtccctgtccccctctctgcagtattttgggcgcagtgtgagtgccagattagac
ctggatggagatggtctgttagacctggctgtgggggcccagggcagtgctgtactactc
agttctcgcagtatagtccagatcaacatgagtctgtccttccagccccactccatcaac
gtcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccgttcccctggaactcacagcagcagcttcaagctgtcggtg
gtggccatgttggatgagagaaagttgacagcgagggcgttgtttgacgacagcaaccag
agacagacacagctgggggtcagagttcacacaggacagaccgtctgccacaacctgccc
atccatgtgtttgacacagcagactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagcggcccagtgctggacgaaggctggcccaccaccttcaagaga
tcgattgcgttcttcaaagactgtggtgaggatgatgtgtgtgtcactgatctggtgctg
caggctcatatggacatctctgggacaagacagcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacagactggagaacgcctacaacaccagc
ctgacactgcactactcacgcaacctccacatctctagtcacagtatacgggaggatacc
cagttgaaaattgagtgtacatctctcagttccaacagtcattcctgtaatgtcagctat
cctgtgttccgctcccactccaaggtgaacttcatgttagagtttgagttcagctgtacg
tctctgctcagtgaagtccagatgaaactcacagttgccagtgacagtgtggagagagag
gctactttgggagacaacagtgttcagctccagactgtggttcagtacgaacctgacctc
ttcatcaccagtgactccaatctgaaccgttatgaggtccacccaaccagaaccatatca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaaactggagttgaggctgagcctgccctctgtagcagctggagacagagtcttc
atggctgttactgaggtcttctcttacaacgtgtcaggggtgaactgcagtgtagacagt
gacgtgtcccagcagaaggacagacagagagatgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacagaccgctctcatacgagtcagccgcagggtccacgacaac
ttcttcagacaggctaagtttaaggtggtgaggatagtgagtgcctatcgtctggctgtt
caggaatataacctggtcacactggggagtggcgccatctggagggagacggtgttggag
gtactaaaggggcgggccatccctatttctctctggattctgataggtagcatcattgga
gggcttctgctattggccctcatcatcttcgcaatgtggaagctggggttcttcactcgt
aaacagataaaggacgaggaactcgaggactga
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