Oncorhynchus kisutch (coho salmon): 109878091
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Entry
109878091 CDS
T09179
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109878091
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109878091
09142 Cell motility
04820 Cytoskeleton in muscle cells
109878091
04810 Regulation of actin cytoskeleton
109878091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109878091
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109878091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP_3
VWA_2
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Metallopep
Motif
Other DBs
NCBI-GeneID:
109878091
NCBI-ProteinID:
XP_031643242
LinkDB
All DBs
Position
LG13:75257206..75365477
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AA seq
1170 aa
AA seq
DB search
MELHKYLLLLKFIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRRGDVYKCIVGEERSSNCTKTYLGESTLQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAKGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSDNGDVNIAQALNGEQ
IGSYYGSEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGEEVFVSNGTLKA
EDRFQDARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRSIVQINMSLSFQPHSIN
VIQKTCQRGGRESACLNATACFLALSHSPGTHSSSFELSVVAMLDERKLTARALFDDSNQ
RQTQLGVRVHTGQTVCHNLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
SIAFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTS
LTLHYSRNLHFSSLSIREDTQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLLSKVQMKLTVASDSVEREATLGDNSVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRVFMAVTEVFSYNVTGVNCSVDS
DVSQLKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDN
FFRQAKFKVVRIVSAYRLAAQESNLVTLGSGAIWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFAMWKLGFFTRKQIKDEELED
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcacaaatacctgctactcctcaagttcatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcgacctcgtatctacactggtccagaggaggcccta
tttggtttctctgtgctacagcatgacaatgcgggggataaatcgatgctggttggtgct
ccttgggatggaccttccaataccaggagaggagacgtgtacaaatgcatcgtgggagag
gagaggagctccaactgcaccaaaacctacctaggtgagagcacgttacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ttggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatt
tgtgcttctgtcagcgacgacctggaacctagagagaccatcgcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcagctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgtacggaggcattcagccctgaacgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacagacggagagtcacatgat
ggggaggagctaccggacgctctggaggagtgtgagaagagaaacatcaccagatatgcc
atcgctgtattgggtcactacatccgcaggcagcaggacccagagacgtttatcagtgag
atcaagtacattgccagcgaccctgacgacaaatacttcttcaacgtgactgacgaggcg
gcactcaacgacatcgtagatgcactaggagaccgcatcttcactctagaggggacgctg
gggtacaacgagagctccttcaagtttgagatgtcccagattggcttctccacacacgtt
ctggatgatggcatcctgtttgggatggtgggggcgtatgactgggacggaggggtgctg
aaggagggtgctaagggccgcatcatgcccaccagagaggcctttgagtcagagttcccc
caggagctcaagaaccatgctgcctatctgggctacacagtgtcgtcagtgatagtggga
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtcatt
ctgtttgaactgagcgacaatggagatgtcaacattgcacaggccctcaatggagaacag
attgggtcatactatggcagtgaggtgtgtgggttggacgtggaccaggatggcattact
gatgttctgctggtggcagcacccatgtacctgggccctggcaacaaggaagcaggcaga
gtctacatctactccctcagtggggaggaggtgtttgtgtctaacggtactctgaaggca
gaggataggttccaggatgctaggtttggctacgccctggcctccgccccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctagaggacggacacaatggtgcc
atatacgtctaccacggccagggcatacacatcatccacaactacaaacagcgtatcgca
gggtcgtccctgtccccctctctgcagtattttgggcgcagtgtgagtgccagattagac
ctggatggagatggtctgttagacctggctgtgggggcccagggcagtgctgtactactc
agttctcgcagtatagtccagatcaacatgagtctgtccttccagccccactccatcaac
gtcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccattcccctggaactcacagcagcagcttcgagctgtcggtg
gtggccatgttggatgagagaaagttgacagcgagggcgttgtttgacgacagcaaccag
agacagacacagctgggggtcagagttcacacaggacagaccgtctgccacaacctgccc
ttccatgtgtttgacacagcagactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagcggcccagtgctggacgaaggctggcccaccaccttcaagaga
tcgattgcgttcttcaaagactgtggtgaggatgatgtgtgtgtcactgatctggtgctg
caggctcatatggacatctctgggacaagacagcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacagacttgagaacgcctacaacaccagc
ctgacactgcactactcacgcaacctccacttctctagtctcagtatacgggaggatacc
cagttgaaaattgagtgtacatctctcagttccaacagtcattcctgtaatgtcagctat
cctgtgttccgctcccactccaaggtgaacttcatgttagagtttgagttcagctgtacg
tctctgctcagtaaagtccagatgaaactcacagttgccagtgacagtgttgagagagag
gctacgttgggagacaacagtgttcagctccagactgtggttcagtacgaacctgacctc
ttcatcaccagtgactccaatctgaaccgttatgaggtccacccaaccagaaccatatca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaacctggagttgaggctgagcctgccctctgtagcagctggagacagagtcttc
atggctgttactgaggtcttctcttacaacgtgacaggggtgaactgcagtgtagacagt
gacgtgtcccagctgaaggacagacagagagatgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacagactgctctcatacgagtcagccgcagggtccacgacaac
ttcttcagacaggctaagtttaaggtggtgagaatagtgagtgcctatcgtctggctgct
caggaatctaacctggtcactctggggagtggcgccatctggagggagacggtgttggag
gtactaaaggggcgggccatccctatttctctctggattctgataggtagcatcattgga
gggcttctgctattggctctcatcatcttcgcaatgtggaagctggggttcttcactcgt
aaacagataaaggacgaggaactcgaggactga
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