Oncorhynchus kisutch (coho salmon): 109878093
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Entry
109878093 CDS
T09179
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
oki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109878093
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109878093
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109878093
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109878093
03036 Chromosome and associated proteins [BR:
oki03036
]
109878093
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109878093
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109878093
SWI/SNF complex
109878093
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109878093
PBAF complex
109878093
SWI/SNF complex
109878093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
109878093
NCBI-ProteinID:
XP_020325910
Ensembl:
ENSOKIG00005041210
UniProt:
A0A8C7JZC1
LinkDB
All DBs
Position
LG3:22747528..22753177
Genome browser
AA seq
385 aa
AA seq
DB search
MRMLIRADLCCYISNMALSKTFGQKPVKFQLEEDGDYYMIGSEVGNYLRMFRGSLYKRYP
SLWRKLASVEERKKIVESSHDHGYTTLATSVTLLKASEVEEIFEGNDEKYKAISISTEPP
AYLREQKGKRNSQWVPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIH
ENATQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAI
ASAIRQQIESYPTDSILDEQTDQRVIVKLNIHVGNISLVDQFEWDMSERENSPEKFALKL
CSELGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGEADQWCPLLETLT
DAEMEKKIRDQDRNTRRMRRLANTW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgctcatccgcgctgatctttgttgttacatttccaatatggcgcttagtaag
acatttggacaaaaacctgtcaaatttcagcttgaagaagatggggattattatatgatt
gggtcagaggtaggaaattacctgcgtatgttcagaggttccttgtataagagataccca
tcactatggaggaaactggcatcagtggaggagcggaagaaaatagtggaatcatcacac
gatcatggttacacaaccttagctaccagtgtgacccttctgaaggcatcagaggtagag
gagatcttcgaaggaaacgatgagaagtacaaagcaatctccatcagcacagagccccca
gcttacctcagggagcagaagggtaagcggaatagtcagtgggtccccacgctacccaac
agctctcatcacctggatgctgtcccctgctccaccactatcaaccgcagccgcttaggc
cgagacaagaagaggaccttcccgctctgttttgatgaccatgatcctgcagtgatccat
gagaatgccacccagtctgaggttctggttccaatccgactggacatggagatagagggg
cagaagcttagggatgctttcacctggaatatgaacgagaagctcatgactcctgaaatg
tttgcggagatcctgtgtgacgacctggacctgaaccccttggcctttgtcccggccatc
gcctcagccatccgccagcagatagagtcctatcccacagacagcatcctggatgaacag
actgaccagagggtcatcgtcaagctaaacatccacgttggaaacatctcgctcgtggac
cagtttgagtgggatatgtcagaaagggagaactccccagagaagtttgccctgaaactg
tgctcggagctgggcctagggggagagtttgtcaccaccattgcttacagcatccgagga
caacttagttggcaccagaggacatacgctttcagtgagaacccgctgcccacggtagag
atagccatccggaacacaggtgaagctgaccagtggtgcccactgctggagacactgaca
gatgcagagatggagaagaagatcagggaccaggatagaaacactcggcgcatgagacga
ctggcaaacacatggtag
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integrated database retrieval system
