Oncorhynchus kisutch (coho salmon): 109878139
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Entry
109878139 CDS
T09179
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109878139 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109878139 (wdr43)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109878139 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
ASA1
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_ACSF4
WD40_2
CFAP251_N
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
109878139
NCBI-ProteinID:
XP_020325945
Ensembl:
ENSOKIG00005020345
LinkDB
All DBs
Position
LG14:43063067..43112080
Genome browser
AA seq
647 aa
AA seq
DB search
MADGGCNSSLRLPCVFSPKSRQYLASFAQDGRLRIWNTDSKILHQEYVPSAHLSATCTCI
VWGPCRIAKEGPRRKKRKSEAGHVEDLADLLALGTVAGSIIIYSAVKGALHCTLDGGHNG
GVNCVEWHPEDGLLYSGSDDSYIVEWDLQTSKTRCKWKADRASVTSLCVSPDGKLLLSAG
QTIKMWDLKTKEVYRKFTGHSTAVTNLRFATTRPPDSNGLYFLSGAAHDRLISVWQVQKD
SNDKNSVVSFTLTDDPQHIDLFTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSGLEDIPVPVPLLAAALTADTRSLLLAYGSYLQPVMERLDVNTAERHVCLTRNVH
TTLTIAMETTVSKVKTPVVNAKSKVIVPGLPGHQAPVKAALGSEKRKKGTDTKEMSIEER
LGEIDLSLKKGGVKETPSLQTDNFAVLLVQGLESKDANILNNVFQTRKDNLIKKTVSRLP
IPAVLPLVEELTKRMQGHPYTAVLMVRWLKAVLMQHTSYLSSLPDLVSQLGVLYHMIESR
VKMFHKLTKLHGKLYLLMTQVVTGDSGVTDVDHKAKLVYEDASSDEDKASGDEGLPDEDS
DNWEEDGIENETMEDEHREEETEEGMRTESKANGDSDMEPGNESEEE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtggatgcaattcttcgttgcgtctaccctgcgttttctcgccaaaatca
cgccaatacctagcttcatttgcccaagatggcagactccgtatatggaacacagatagt
aaaatacttcatcaagaatacgtgccttcagcccacttgagtgccacttgtacttgcata
gtttggggaccatgccgaatcgccaaggagggacctcggaggaagaagaggaaatcagag
gcagggcatgtggaggatttggcggatctgttggctctgggaacggtggcgggcagcatt
ataatttacagcgcagtgaagggggcactgcactgcacactggatggaggtcacaatggg
ggagtgaactgtgttgagtggcaccccgaggacggcctgctctacagcggctcagacgac
tcctacatcgtagagtgggacctgcagacaagcaagacccgctgtaagtggaaggcggac
cgtgcgtcagtgaccagtctgtgtgtgagtcctgatggcaaactgctgctctcagcggga
cagaccatcaagatgtgggacctcaagaccaaggaggtgtaccggaagttcacaggtcac
tccacagccgtgacgaacctgcgcttcgccaccacgcgtcccccggacagcaatggcctc
tacttcctgtccggggcggcccacgacagactcatcagcgtgtggcaagtccagaaggat
agcaatgacaagaactcggtggtgtccttcaccctgacggacgacccccagcacattgac
ctcttcacttccaacagcaaggaagaggcggtgaggctggcggttgtgtgtaaggatggg
caacttcatctctttgagcactttctgaacgggccttgtaagaagccgctgtccccctcc
tgtacagtccagatgtctgggcttgaggacatccccgtgcccgttcctctgttggccgcg
gccctcactgcagacacacgcagcctcctgcttgcctatggcagctacctgcagcccgtc
atggagagattggatgtgaacacagcagagagacacgtctgcctaacccgcaatgtccac
accaccctcaccatcgccatggaaactactgtttccaaggtgaaaaccccagtagttaac
gccaagagcaaagttattgtccctggtcttcccggtcaccaagcgccggtcaaagcagct
ttaggatccgagaagaggaaaaagggcacagacaccaaagagatgtccatagaggagcga
ctgggagagatcgacttgtcacttaagaagggcggagtcaaggaaaccccctctctgcag
acggacaacttcgcggtgctactggtgcagggtctggagagcaaggacgccaacatcctc
aataatgtgtttcagacccggaaggataacttaataaagaaaaccgtttcccggttaccc
atccctgccgtcttgccattggtggaagagctcaccaagagaatgcaagggcatccatac
acggcagtgctgatggtgcgatggctcaaggctgttctcatgcagcacacctcctacctg
tcctcgttgccagacctggtgtctcagctgggagtgttgtaccacatgattgagagcaga
gtcaaaatgttccacaaactgaccaagctgcacggcaagctctatctgctcatgacacag
gtggtgacaggtgacagtggtgtcacagacgtggaccataaggccaagcttgtctacgag
gacgcgtcctctgatgaagacaaggcttcaggcgatgaaggtcttccagacgaagattct
gataactgggaggaggatggcatagagaatgagactatggaagacgagcatagagaagaa
gagacggaggaaggcatgaggacggaatccaaagctaacggtgattccgacatggaaccg
ggaaacgagagcgaggaagagtga
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integrated database retrieval system