Oncorhynchus kisutch (coho salmon): 109878148
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Entry
109878148 CDS
T09179
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109878148
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109878148
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
SALM family
109878148
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109878148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
ig
LRR_9
fn3
Ig_VEGFR-1-like_5th
Ig_2
Ig_C17orf99
LRRCT
GP79
Sp38
Motif
Other DBs
NCBI-GeneID:
109878148
NCBI-ProteinID:
XP_031644297
Ensembl:
ENSOKIG00005020832
LinkDB
All DBs
Position
LG14:complement(44102736..44284154)
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AA seq
797 aa
AA seq
DB search
MDKVLSSLLLLGTAVMMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNFILKVTPQDFANMTGLVDLTLSRNTISAILPFSFLDLETLRSLHLDSNRLTELGPDDL
RGLVNLQHLILNNNQLNRISKVAFDDLMLTLEDLDLSYNNLRGVPWESICKMVNLHQLSL
DHNLISHIAEGTFTDLDKLARLDLTSNRLQKLPPDPIFTRSQTNLILTTPYAPQLSLSFG
GNPLHCNCEVLWLRRLDREDDMETCASPPSLKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAIGDPMPIIHWVAPDDRLISNSSRATVYDNGTLDITITTSKDYGTFTCI
AANAAGESTASIELSIIQLPHLSNGTNHTAQPKSRLSDITSSTKTSKGESKPLPEKVVSV
SEVSASSALVKWTVSKTAPKVKMYQLQYNCSEDEVLIYRMIPVASKTFLVTNLVQDMQYD
LCVLAIWDDTATTLTATNVVGCVQFITRDNYPQCQSLQSQFLGGTMILVIGGIIVVTLLI
FIIILMVRYKVCSSPHSSKLPVVSNMYSQTNSVSTQVKPQITTTVVVMRDEMVEFKCGSL
QSSLSSSSSDSLDSRKTRGRLGNEDQYSLRDIEFSTLPSTSNWRRHRGPSSAKARPNLDN
LLGAFASLELRGSATTRDQGASCSSTTTSSALVAVTMAPPSDKEPLLGRAESTTMLGRFL
GLPQEGKPKRSHSFDYGHVGSSGGAQSLSNYPRHISNIWTKRSLSVNGMLLQYDDSEDGE
AEEVPFESSEWVMESTV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtgctcagcagcctcctgcttctgggaactgcagtgatgatggcccatgca
tgccccaagtactgtgtctgccagaacctgtctgagtccctgggtaccctctgcccatcc
aaaggcttgctcttcgtaccactggacatagaccggcggaccgtagagctccgcctgggc
ggcaacttcatcctcaaggtcacaccgcaggactttgccaacatgacgggcctggtggac
ctcaccttgtcccgcaacaccatcagtgccatcctgcctttctccttcctcgacctggag
accctgcgctccctgcacctggacagcaaccgcctgaccgagctgggaccagacgacctg
cgtggccttgtcaacctgcagcacctcatcctcaacaacaaccagctcaaccgcatctcc
aaggtggcttttgatgatctgatgctgacactggaagacctggacctgtcctacaacaac
ttgcggggtgtaccttgggagtccatctgcaagatggtcaacctccaccagttgagtctt
gatcataacctcatctcgcacatcgcagaggggacatttacggacctggacaagctggcg
cgcctggacctcacgtccaaccgtctccagaagctcccgccagaccccatcttcacccgt
tcccagactaacttaatactgaccactccctacgcccctcagctttccctgagctttggg
ggaaaccccctgcattgcaactgtgaagtgctttggctccggaggctggacagagaggac
gatatggagacctgcgcttcccctcccagtctaaagggacgctacttttggtccgttcgg
gaagaagagtttgtctgtgaaccgcccctgatcacccaacacacgcacaagttgttagtc
ctggagggccaaacagctagcctacgctgcaaagctatcggcgacccaatgccgatcata
cactgggtcgccccagacgaccgtttgattagcaattcgtcccgagcgaccgtgtacgat
aacggcaccctggatattaccatcaccacgtccaaggattacggcaccttcacttgcatc
gcagccaacgcagcaggggaatcgactgcctctatagaactatccatcattcaactgcca
cacctcagcaatggtaccaaccacaccgcacagcccaagtcccggctctcggatatcacc
agctctaccaagaccagtaagggggagtccaagcctctaccggaaaaggtggtatctgta
tcggaggtgtctgcatcctctgctctggtcaagtggactgttagcaaaacagcacccaag
gtcaagatgtaccagctccagtacaactgctccgaagatgaagtcctgatttacaggatg
attcccgtggccagcaaaacctttttagtcaccaacctggtccaagacatgcagtacgac
ctatgtgtcctggctatctgggatgacactgccaccaccctaactgccaccaacgtagtg
ggctgtgtgcagttcatcacccgtgacaactacccgcagtgccagtccctccaaagccag
ttcctgggcggcactatgatcctggtgataggtggcattatcgtggtcacgctcctcatc
ttcatcatcatcctcatggttcggtacaaagtgtgcagcagcccccattccagtaagctg
ccagtggttagcaacatgtactcccagaccaacagtgtgagtacacaggtcaaacctcag
atcacaaccacagtggtcgtaatgcgggatgagatggtggaattcaaatgtggctcgctc
cagagcagcctctcctcgtcttcatctgactcgttggacagtcgcaaaactagaggcaga
ttaggaaacgaggaccagtacagtcttcgagacatcgagttcagcacactccccagcacc
agtaattggaggaggcacagggggccatcatcagccaaggctaggcccaacttagacaac
cttttaggggcttttgcctcactggagctccggggctcggctacgactagggaccaaggg
gcatcttgttcctccaccaccacctccagtgcattggtggctgtgaccatggcccctccg
tctgacaaggaacccttgctgggccgagccgagtccaccaccatgctggggcgttttcta
ggcctgccccaggaagggaagcccaagaggagccactcattcgactacggccacgtgggt
agcagcggtggcgcacagagcctcagcaactaccctcgtcacatcagcaacatctggact
aagaggagtctgtcagtaaacgggatgctactgcagtatgacgacagcgaagacggtgag
gccgaagaggtgccattcgagagctcagagtgggtgatggagagcactgtttga
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