KEGG   Oncorhynchus kisutch (coho salmon): 109878162
Entry
109878162         CDS       T09179                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109878162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109878162
   03041 Spliceosome [BR:oki03041]
    109878162
   03032 DNA replication proteins [BR:oki03032]
    109878162
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     109878162
Spliceosome [BR:oki03041]
 Complex A
  U1 snRNP components
   Sm proteins
    109878162
  U2 snRNP components
    109878162
 Complex B
  U1 snRNP components
    109878162
  U4/U6.U5 tri-snRNP components
    109878162
 Complex C
  U2 snRNP components
    109878162
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     109878162
SSDB
Motif
Pfam: LSM Kringle
Other DBs
NCBI-GeneID: 109878162
NCBI-ProteinID: XP_020325973
Ensembl: ENSOKIG00005041538
UniProt: A0A8C7K2L4
LinkDB
Position
LG3:complement(22799699..22801160)
AA seq 127 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGMGRG
NIFPKRR
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccattggagtgccaatcaaagtccttcatgaagctgagggccacatcgttacctgc
gagaccaacaccggggaggtgtaccgggggaaactcattgaagctgaggacaacatgaac
tgccagatggccaacatcacagtgactcacagagacggccgtgtagcccagctggagcaa
gtgtacatccgaggcagcaagattcgattccttattctaccagacatgctgaagaatgca
ccaatgctaaagagtatgaagaacaagaaccagggagctggagctgggagaggcaaagct
gccattctcaaagcacaagtggctgctaggggtcgaggacgtggagggatgggaagagga
aatatattcccgaaaaggcgataa

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