Oncorhynchus kisutch (coho salmon): 109878171
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Entry
109878171 CDS
T09179
Name
(RefSeq) alsin isoform X3
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109878171
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109878171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
109878171
NCBI-ProteinID:
XP_020325980
Ensembl:
ENSOKIG00005038534
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All DBs
Position
LG5:10832293..10854817
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AA seq
1717 aa
AA seq
DB search
MHQHCHGQISVMESQRKRYAAPSSGEDSSGERGLLHTWKGYSCSVTPERVLLSRPVLQAA
LGTRHGVLLVEGGQVYSFGEFPWKQSQVSEVGPLKPVLESALSGQRVVAVAAGNFHSGAV
TEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPDTSPPHTIRVLELACGEQHSLALS
AQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEAR
RPLPDKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLDDGEARLEPGRSPPLRLQSSP
SEPLSSHTSASAPGLHPSITDHTGYERRRTVAQNGEVLTTTDSDISAAGTDSGRTVGGVG
GAGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIARASFQPPADSLDLLTSDLLPGVM
PVTTSSALNSLVSSCASAVAERVVSTCEALSLKKRINCYNPGVGGVAGAPGGVPGGFPGG
PAEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPKVRAV
PLTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAA
GAHHSLALTAQSQVFSWGSNSSGQLGHMACPTTIPRLAKLSEGIRVWDVGAGAQHTLLLA
DGDCYQPILYYSGQQVREAAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCV
ALADRNVTGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLGENYCSRYSSAGQRPWVR
ESLGTALGPASTVLLQSLARCYSRLCHLTGQHSASLTANLRRRREVKSLVMLEHASIFLD
TYNEYCCSVGNFLVMGGFHALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLP
MRHLHEYGRLLLKLGTCFEVSSVDYQQLQDGCSKFEALALHLKRRRKEAEYTYQFWKSFP
GKMTVSGLDSLRKPPRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLF
STHHVFPLATLWVEPIPEENTDLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAM
SGAGQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNG
LEDGFGDYVMPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLR
SGTLNSSSPSVFIGQWVHDKKTGYGVFDDITRGEKYMGMWQDDQRQGTGVIVTQFGLYYE
GAFNNNKMQGTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMANGDYFEGTFTGEWGSGLKV
TGSFFKPNLYDSDGDKGRAVKLGRLAVRPEQKWRAVFEECWMRLGCEAPGQGENQRAWEN
IAVALTTSRRLHRDCPEMNLSQSHNITLESLEFNPQQHVGPVTMERYDRIRHYLIKACDT
PLHPLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGG
VIPEPSSDPQDKKDSNCADTQLESPKPGRVVSSSSLLLPVLLPRLYPPLFTLYALEKERE
DDVYWECVLRLNKQPDMALLAFLGVQHKFWPVSVPVLGERTEVVSSTKDACFASATETLQ
QISTTFTPSDKLQVIQLTFEEITKEVVSSLENSFLWSMDDLFPVFLYVVLRARIRNLGSE
VSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaaaggtatgca
gccccgagctctggtgaggacagttcaggggagcgaggtttgctccacacctggaagggc
tactcctgtagtgtcaccccagagagagtgctcctgtccaggcctgtgctgcaggctgcc
ctgggaacacgccatggggttctactggtggagggcgggcaggtgtacagctttggtgag
ttcccatggaaacagagccaggtctcggaggtgggccccctgaagcccgtcctagagagc
gctctcagcggccagcgcgttgtcgccgtggcagcgggcaacttccacagcggggcggtt
accgaggacggcggggtccacatgtggggggagaactccttcggccagtgtggcctgtcc
agcctcactgtagtccccaaccctactccagtggctgtcctggaccccgacaccagcccc
cctcataccatccgggtcctggagctggcctgcggggagcagcactcccttgctctctct
gcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtcaccaccatc
ttccccgtatggaagccccagaaggtggagcacctggcgggcagacacgtccttcaggtg
gcctgtggggccttccacagccttgccttggtgcgttgcctaccacctcaggaggcccgg
cggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatgacggacaag
gaggaccacgtcattatctcagatagtcattactgccccctaggggtggagttgctggat
gacggagaggccaggctggagcctggaaggtcccctccactcaggctccagagctcccct
tcagagcccctctcctctcatacctcggcctcagcgcctggtctccatccctcaataaca
gaccatacaggctatgagaggaggaggacagtggcacagaatggggaagtcttaaccact
acagactctgacatctctgctgctgggacagactcaggtcgaactgttggcggtgtgggg
ggtgcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctcaag
aaactgtctgacacctcattggctgaggagactgccaagatgaccatagcaagagcaagt
tttcagcccccagcagatagccttgacctcctgacctctgacctcctccctggggtcatg
ccagtgaccaccagctctgccctcaacagcctggtctcatcctgtgcctccgccgtggcc
gagagagtggtctccacctgcgaggctctgtccctgaagaagaggattaactgctacaac
cctggggttgggggtgtagcaggagcacccggtggggtgccaggagggtttccagggggc
cccgcggaggagcgggtgcgtctggaggagtccatgcaggggaagaagagctgcagcacg
ggggatatccgtgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactc
ctctctcaggtgtcccccaggttgctgcggagggccagccggcccaaggtgcgagcggtg
cccctcacccctgtgggagggctaccagaggcgggggagctgctcccctccctgcagacc
gaggtgtggagctgggggcgtggtgaggagggccagctaggccacggggacaacctcccc
aggctgcagccactgtgcatcaagtgcctgagcagtaaggaggtggtgcttgtggctgct
ggggcacatcactccctggccctgacggcacagtcccaggtcttctcctggggtagtaac
agctctggccagctaggacacatggcgtgtccgactactatccctcgccttgccaagctg
tctgaggggatccgtgtatgggacgtgggtgcgggggcgcagcacaccctcctcctggcc
gatggggactgttaccagcccatcctttactatagcggacagcaggtcagagaggcggct
caggacgcaccccaggaccagacagaggggtacagctacacccagcaaccagtgctgctc
cccttctgcatgaacttgggctacgtgagcggtgtttttgcggggggccagagctgcgtg
gcgctagccgaccgcaacgtcacaggtttcatcgccagcctccatgagctggctgctgcc
gagaggaagttctactgcaagctgagctctgtgaagaaccacatcctgcgccccctgttg
gacctgggtgagaactactgctcccgctacagctccgctggacagaggccatgggtcaga
gagtcgttgggtacagccctaggcccggcgtccacagtgctgctacagagcctggcgagg
tgttatagccgcctgtgccacctcactgggcagcactccgcctcgctcaccgccaacctg
cgccgccgtcgggaggtgaaaagcttggttatgctggagcacgccagcatcttcctggac
acgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggcttccatgct
ctggccaagccctcgctagatttctttgggaagtgtccagagctgttgcagcggctggca
gagtccagcgaggagaacattcctctgagtgacctgttggtggcgctcttctacctgccc
atgagacaccttcacgagtatggcaggctgctgctcaaactgggaacctgcttcgaggtg
agctcagtggactaccagcagctgcaggatggctgctctaagtttgaggccctggctctt
catctgaagaggaggaggaaggaggcagagtacacgtaccaattctggaagagcttccct
ggcaagatgacggtcagtggcctggattccctgcgtaagcccccccggaggctgatctgt
gagagcagtaacaaggccctgacgctacagaactctggaaggttctctgtcaactggttc
atcctcttcaatgatgcactcgtccacgctcagggcgtggttccctataaaagccttttc
tccacccaccatgtcttcccattggccacactgtgggtcgagcccatccctgaggagaac
actgacctgtatggactgaaggttatctcacctgaggagaccttcaccctgctggcttgt
tcttccatggagaaggccaagtggcttcgctccatcaaccaggcggtggaccaggccatg
agtggggcggggcagagggcggagcctcccatctcccggaccgcctcctacaccttctac
aaggacagccgtctgaaggaggccacctacgagggccgctggctggccggcaagcccaat
gggaggggaatggtgaagtggcttgatgggagaatttacacggggacgttcaagaacgga
ctggaggatggttttggagattacgttatgcccagcaagacgttaaacctgaacgaccac
tatcaaggccactggaaagaagggaagatgcacggcatcggaacatacaagtatgctaca
ggtgagttgtacgagggctcgttccaggacaacatgcgtcacggacacgggatgctgcgc
agcggcacgctgaactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaag
aagacgggctacggcgtctttgatgacatcaccagaggagagaagtacatgggcatgtgg
caggatgaccagcggcagggcacgggcgtcatagtaacccagtttggcctgtactacgag
ggagccttcaacaacaacaagatgcagggcacaggggtcttgctgtctgaggacaacacc
acatatgaaggagagttctcggaggactggactctcaacggaaagggtgtgctgaccatg
gctaatggggactactttgagggcaccttcaccggggagtggggctccggcctgaaggtc
accggatccttcttcaaacccaacctctacgactcagacggggacaagggccgcgcagtt
aagctggggcgcctggcggtgcgtccggagcagaagtggagggcagtgtttgaggagtgt
tggatgaggctgggctgtgaggcccctggccagggagagaaccagagagcctgggagaac
atcgctgtagccctgaccaccagcaggagactgcacagagactgcccggagatgaacctg
agtcagagtcataacataactctggagagtctggagttcaaccctcagcagcatgttggc
cctgttaccatggagaggtatgaccgtatccgccattacctcatcaaggcgtgtgacacg
cccctacaccccctgggcaggctgatggagaccctagtggctgtctacaggatgacctac
gtgggggtgggggccaaccgccgcctcctactgcaggctgtcaacgagatcatgtcctac
ctggcacgcatcttccaactcgtcaggttcctgttcccagatctgcctgaggagggtgga
gtgatccctgaaccatcctctgacccccaggacaagaaggattccaactgcgcagacacc
cagctagaatcccccaaacctggacgtgtagtgagtagctcctctctgctcctgccggtg
ttactgcctcgtctctacccccctctcttcaccttgtacgccctggagaaggagagggag
gacgacgtgtactgggagtgtgtcctccgcctcaacaaacagccagacatggccctgctc
gccttcctcggagtgcaacataagttttggccggtttcggttccagtgctgggggagagg
acagaggttgtgtccagcacaaaagacgcctgttttgcctcggcaacggagaccttacag
cagatcagcacaacgttcaccccatccgacaagctgcaggtgatccagctgacattcgag
gagatcacaaaggaagtggtgtcatcactggagaatagcttcctgtggtccatggacgac
ctgtttcctgtgttcctctacgtggtgctgcgcgcccggatcaggaatctggggtcagag
gtgagtctgatagaggacttgatggacccctgtgtacagcatggagaacacggcatcatg
ttcaccactctcaaggcgtgttactatcagatccagcatgagaagaccacatga
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integrated database retrieval system