KEGG   Oncorhynchus kisutch (coho salmon): 109878171
Entry
109878171         CDS       T09179                                 
Name
(RefSeq) alsin isoform X3
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109878171
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    109878171
SSDB
Motif
Pfam: RCC1 RCC1_2 MORN VPS9 PH RhoGEF
Other DBs
NCBI-GeneID: 109878171
NCBI-ProteinID: XP_020325980
Ensembl: ENSOKIG00005038534
LinkDB
Position
LG5:10832293..10854817
AA seq 1717 aa
MHQHCHGQISVMESQRKRYAAPSSGEDSSGERGLLHTWKGYSCSVTPERVLLSRPVLQAA
LGTRHGVLLVEGGQVYSFGEFPWKQSQVSEVGPLKPVLESALSGQRVVAVAAGNFHSGAV
TEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPDTSPPHTIRVLELACGEQHSLALS
AQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHVLQVACGAFHSLALVRCLPPQEAR
RPLPDKCGQCNQLLYTMTDKEDHVIISDSHYCPLGVELLDDGEARLEPGRSPPLRLQSSP
SEPLSSHTSASAPGLHPSITDHTGYERRRTVAQNGEVLTTTDSDISAAGTDSGRTVGGVG
GAGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTIARASFQPPADSLDLLTSDLLPGVM
PVTTSSALNSLVSSCASAVAERVVSTCEALSLKKRINCYNPGVGGVAGAPGGVPGGFPGG
PAEERVRLEESMQGKKSCSTGDIREEEAEGLSRRLSLPGLLSQVSPRLLRRASRPKVRAV
PLTPVGGLPEAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAA
GAHHSLALTAQSQVFSWGSNSSGQLGHMACPTTIPRLAKLSEGIRVWDVGAGAQHTLLLA
DGDCYQPILYYSGQQVREAAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSGVFAGGQSCV
ALADRNVTGFIASLHELAAAERKFYCKLSSVKNHILRPLLDLGENYCSRYSSAGQRPWVR
ESLGTALGPASTVLLQSLARCYSRLCHLTGQHSASLTANLRRRREVKSLVMLEHASIFLD
TYNEYCCSVGNFLVMGGFHALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLP
MRHLHEYGRLLLKLGTCFEVSSVDYQQLQDGCSKFEALALHLKRRRKEAEYTYQFWKSFP
GKMTVSGLDSLRKPPRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLF
STHHVFPLATLWVEPIPEENTDLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAM
SGAGQRAEPPISRTASYTFYKDSRLKEATYEGRWLAGKPNGRGMVKWLDGRIYTGTFKNG
LEDGFGDYVMPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGELYEGSFQDNMRHGHGMLR
SGTLNSSSPSVFIGQWVHDKKTGYGVFDDITRGEKYMGMWQDDQRQGTGVIVTQFGLYYE
GAFNNNKMQGTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMANGDYFEGTFTGEWGSGLKV
TGSFFKPNLYDSDGDKGRAVKLGRLAVRPEQKWRAVFEECWMRLGCEAPGQGENQRAWEN
IAVALTTSRRLHRDCPEMNLSQSHNITLESLEFNPQQHVGPVTMERYDRIRHYLIKACDT
PLHPLGRLMETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGG
VIPEPSSDPQDKKDSNCADTQLESPKPGRVVSSSSLLLPVLLPRLYPPLFTLYALEKERE
DDVYWECVLRLNKQPDMALLAFLGVQHKFWPVSVPVLGERTEVVSSTKDACFASATETLQ
QISTTFTPSDKLQVIQLTFEEITKEVVSSLENSFLWSMDDLFPVFLYVVLRARIRNLGSE
VSLIEDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq 5154 nt   +upstreamnt  +downstreamnt
atgcatcagcattgccatggacaaatctcagtgatggagtcccagaggaaaaggtatgca
gccccgagctctggtgaggacagttcaggggagcgaggtttgctccacacctggaagggc
tactcctgtagtgtcaccccagagagagtgctcctgtccaggcctgtgctgcaggctgcc
ctgggaacacgccatggggttctactggtggagggcgggcaggtgtacagctttggtgag
ttcccatggaaacagagccaggtctcggaggtgggccccctgaagcccgtcctagagagc
gctctcagcggccagcgcgttgtcgccgtggcagcgggcaacttccacagcggggcggtt
accgaggacggcggggtccacatgtggggggagaactccttcggccagtgtggcctgtcc
agcctcactgtagtccccaaccctactccagtggctgtcctggaccccgacaccagcccc
cctcataccatccgggtcctggagctggcctgcggggagcagcactcccttgctctctct
gcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtcaccaccatc
ttccccgtatggaagccccagaaggtggagcacctggcgggcagacacgtccttcaggtg
gcctgtggggccttccacagccttgccttggtgcgttgcctaccacctcaggaggcccgg
cggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatgacggacaag
gaggaccacgtcattatctcagatagtcattactgccccctaggggtggagttgctggat
gacggagaggccaggctggagcctggaaggtcccctccactcaggctccagagctcccct
tcagagcccctctcctctcatacctcggcctcagcgcctggtctccatccctcaataaca
gaccatacaggctatgagaggaggaggacagtggcacagaatggggaagtcttaaccact
acagactctgacatctctgctgctgggacagactcaggtcgaactgttggcggtgtgggg
ggtgcagggtctcagaactccccctaccctgatgatcaggcagtgaaagaatatctcaag
aaactgtctgacacctcattggctgaggagactgccaagatgaccatagcaagagcaagt
tttcagcccccagcagatagccttgacctcctgacctctgacctcctccctggggtcatg
ccagtgaccaccagctctgccctcaacagcctggtctcatcctgtgcctccgccgtggcc
gagagagtggtctccacctgcgaggctctgtccctgaagaagaggattaactgctacaac
cctggggttgggggtgtagcaggagcacccggtggggtgccaggagggtttccagggggc
cccgcggaggagcgggtgcgtctggaggagtccatgcaggggaagaagagctgcagcacg
ggggatatccgtgaggaggaggccgagggcctgagtcgacgtctctctctgcctggactc
ctctctcaggtgtcccccaggttgctgcggagggccagccggcccaaggtgcgagcggtg
cccctcacccctgtgggagggctaccagaggcgggggagctgctcccctccctgcagacc
gaggtgtggagctgggggcgtggtgaggagggccagctaggccacggggacaacctcccc
aggctgcagccactgtgcatcaagtgcctgagcagtaaggaggtggtgcttgtggctgct
ggggcacatcactccctggccctgacggcacagtcccaggtcttctcctggggtagtaac
agctctggccagctaggacacatggcgtgtccgactactatccctcgccttgccaagctg
tctgaggggatccgtgtatgggacgtgggtgcgggggcgcagcacaccctcctcctggcc
gatggggactgttaccagcccatcctttactatagcggacagcaggtcagagaggcggct
caggacgcaccccaggaccagacagaggggtacagctacacccagcaaccagtgctgctc
cccttctgcatgaacttgggctacgtgagcggtgtttttgcggggggccagagctgcgtg
gcgctagccgaccgcaacgtcacaggtttcatcgccagcctccatgagctggctgctgcc
gagaggaagttctactgcaagctgagctctgtgaagaaccacatcctgcgccccctgttg
gacctgggtgagaactactgctcccgctacagctccgctggacagaggccatgggtcaga
gagtcgttgggtacagccctaggcccggcgtccacagtgctgctacagagcctggcgagg
tgttatagccgcctgtgccacctcactgggcagcactccgcctcgctcaccgccaacctg
cgccgccgtcgggaggtgaaaagcttggttatgctggagcacgccagcatcttcctggac
acgtacaatgagtactgctgctctgtgggtaacttcctggtgatggggggcttccatgct
ctggccaagccctcgctagatttctttgggaagtgtccagagctgttgcagcggctggca
gagtccagcgaggagaacattcctctgagtgacctgttggtggcgctcttctacctgccc
atgagacaccttcacgagtatggcaggctgctgctcaaactgggaacctgcttcgaggtg
agctcagtggactaccagcagctgcaggatggctgctctaagtttgaggccctggctctt
catctgaagaggaggaggaaggaggcagagtacacgtaccaattctggaagagcttccct
ggcaagatgacggtcagtggcctggattccctgcgtaagcccccccggaggctgatctgt
gagagcagtaacaaggccctgacgctacagaactctggaaggttctctgtcaactggttc
atcctcttcaatgatgcactcgtccacgctcagggcgtggttccctataaaagccttttc
tccacccaccatgtcttcccattggccacactgtgggtcgagcccatccctgaggagaac
actgacctgtatggactgaaggttatctcacctgaggagaccttcaccctgctggcttgt
tcttccatggagaaggccaagtggcttcgctccatcaaccaggcggtggaccaggccatg
agtggggcggggcagagggcggagcctcccatctcccggaccgcctcctacaccttctac
aaggacagccgtctgaaggaggccacctacgagggccgctggctggccggcaagcccaat
gggaggggaatggtgaagtggcttgatgggagaatttacacggggacgttcaagaacgga
ctggaggatggttttggagattacgttatgcccagcaagacgttaaacctgaacgaccac
tatcaaggccactggaaagaagggaagatgcacggcatcggaacatacaagtatgctaca
ggtgagttgtacgagggctcgttccaggacaacatgcgtcacggacacgggatgctgcgc
agcggcacgctgaactcctcctcccccagcgtcttcatcggccaatgggtgcacgacaag
aagacgggctacggcgtctttgatgacatcaccagaggagagaagtacatgggcatgtgg
caggatgaccagcggcagggcacgggcgtcatagtaacccagtttggcctgtactacgag
ggagccttcaacaacaacaagatgcagggcacaggggtcttgctgtctgaggacaacacc
acatatgaaggagagttctcggaggactggactctcaacggaaagggtgtgctgaccatg
gctaatggggactactttgagggcaccttcaccggggagtggggctccggcctgaaggtc
accggatccttcttcaaacccaacctctacgactcagacggggacaagggccgcgcagtt
aagctggggcgcctggcggtgcgtccggagcagaagtggagggcagtgtttgaggagtgt
tggatgaggctgggctgtgaggcccctggccagggagagaaccagagagcctgggagaac
atcgctgtagccctgaccaccagcaggagactgcacagagactgcccggagatgaacctg
agtcagagtcataacataactctggagagtctggagttcaaccctcagcagcatgttggc
cctgttaccatggagaggtatgaccgtatccgccattacctcatcaaggcgtgtgacacg
cccctacaccccctgggcaggctgatggagaccctagtggctgtctacaggatgacctac
gtgggggtgggggccaaccgccgcctcctactgcaggctgtcaacgagatcatgtcctac
ctggcacgcatcttccaactcgtcaggttcctgttcccagatctgcctgaggagggtgga
gtgatccctgaaccatcctctgacccccaggacaagaaggattccaactgcgcagacacc
cagctagaatcccccaaacctggacgtgtagtgagtagctcctctctgctcctgccggtg
ttactgcctcgtctctacccccctctcttcaccttgtacgccctggagaaggagagggag
gacgacgtgtactgggagtgtgtcctccgcctcaacaaacagccagacatggccctgctc
gccttcctcggagtgcaacataagttttggccggtttcggttccagtgctgggggagagg
acagaggttgtgtccagcacaaaagacgcctgttttgcctcggcaacggagaccttacag
cagatcagcacaacgttcaccccatccgacaagctgcaggtgatccagctgacattcgag
gagatcacaaaggaagtggtgtcatcactggagaatagcttcctgtggtccatggacgac
ctgtttcctgtgttcctctacgtggtgctgcgcgcccggatcaggaatctggggtcagag
gtgagtctgatagaggacttgatggacccctgtgtacagcatggagaacacggcatcatg
ttcaccactctcaaggcgtgttactatcagatccagcatgagaagaccacatga

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