Oncorhynchus kisutch (coho salmon): 109878201
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Entry
109878201 CDS
T09179
Name
(RefSeq) desmin
KO
K07610
desmin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04519
Cadherin signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109878201
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109878201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109878201
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109878201
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF8429
ZK652
ANG-1
KIF21A_4th
Mua
DUF7491
COLEC12
TolA_bind_tri
DUF1664
CCDC89
CLIP1
WXG100
DUF7432
GeBP-like_DBD
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
109878201
NCBI-ProteinID:
XP_031680260
Ensembl:
ENSOKIG00005037516
LinkDB
All DBs
Position
LG5:10700337..10705974
Genome browser
AA seq
482 aa
AA seq
DB search
MSSYRSSAQSAQSGSSSYRRTFGAGYSPAMSHSLYSSRGSSGGLGHGGSGHISSRVYEVT
KTSASPSYSGYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLADALNQEFLHTRTNEKV
ELQHLNDRFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVEALT
NQRSRVEVERDNLGEDLDKLKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERRIE
TLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKNIS
EAEEWYKSKVTDLNQAVNKNNEALKEAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQMR
EMEERHGREAGGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKLLE
GEESRISLPIQNYSTMTFRETSPEHHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQQD
IM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctaccgctcttctgctcagtcggcccagtctggctcttcctcctaccgccgc
acctttggcgcaggatacagccctgccatgtcccattccctctacagcagccggggctcg
agtggggggctcggacatggcggctccggccacatctcctcccgggtctacgaagtcacc
aagacctccgcctcgccctcttactccggctaccgcacctcgtctcactttggcggacct
gtgatgtcatcgaccgcccacggttcacggtcctatgcggggatgggggagacgctagac
ttcagcctggccgacgcgctgaaccaggagttcctccacacgcgcaccaacgagaaggtc
gagctgcagcacctgaacgaccgcttcgccagctacatcgagaaagttcgcttcctggag
cagcagaacgctacattggtggtggagattgagaggctgcgggggcgtgaacccacacgc
atcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggaggccttgact
aatcagaggagccgcgtcgaggtggagagggacaacctgggtgaagacttggacaaactc
aaactcagactgcaggaagagatccttcagagggaggacgcagagaacaacctggctgct
ttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgcatcgag
acgctacaggaggagatcgccttcctcaagaagattcacgaggaggagatccgtgagatg
cagtctcagatgcaggagacccaggtgcagatccagatggacatgtccaagccggacctg
acagctgccctcagggacatcagggcccagtacgagggcatcgccgccaagaacatctca
gaggctgaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaacaagaac
aatgaggctctgaaggaggccaagatggagaccatggagttcagacaccagctccagtcc
tacacctgtgagattgactcacttaaaggcaccaacgagtctctgatgaggcagatgaga
gagatggaggagcgccacgggcgggaggccggcgggttccaggacaccatctcccgtctg
gaggctgagatcgccaacatgaaggatgagatggccaggcacctgagagagtaccaggac
ctgctcaatgtcaagatggccctggacgtagagatagcaacctacaggaaactgctggag
ggagaggagagcaggatttccctgcccatacagaactattccaccatgactttccgtgaa
acgagtccagagcatcatcaccgcgttgctgagtcacactcaaagaaaagtgtccttatc
aagaccatcgagacccgtgatggagaggtggtctctgagtcaacacagcaccagcaggat
atcatgtaa
DBGET
integrated database retrieval system