Oncorhynchus kisutch (coho salmon): 109878268
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Entry
109878268 CDS
T09179
Name
(RefSeq) homeobox protein cut-like 2 isoform X2
KO
K09313
homeobox protein cut-like
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109878268
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
109878268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
109878268
NCBI-ProteinID:
XP_020326102
Ensembl:
ENSOKIG00005043916
LinkDB
All DBs
Position
LG3:23054556..23179095
Genome browser
AA seq
1539 aa
AA seq
DB search
MAADVGSMFQYWKKFDLRRLQRELNSVASELAGRQEESEHSHKHLVELSREFKRNVSEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPAPVLEATHTLEERLQQLQ
SSAPDSEALVREVSRHWRRHLECLNKPDDTEDGPAAASGAVEASSRTAYGMTPKSKQAFR
ATCSPQQNHQIQSQTEGKAEDADTTLADRLGEAEERIKVLHSSLSTAQTDLLDLRCKYDQ
EKANKVEEVSVIMMNLEKANQKAEIAQRQVERLKEQLASARSTTPGSYNPPEGTSGERDE
KGGVLSSKLEAKLIAKDREILRLLENVQRLQFALQEVQDTSANQVISLEHQLAYKTEAIE
RLETKLQSQMDYDEIKTDLSILKVMKLASANGSSSQESAKAAEALLLDKEAFLPSHKYLM
DKARVLHNNDEDQSEESGREGGRPTGSFFSVSQVDVRTSASPGPPTMEVSSSSYDLPRPF
SVSPCSGGRLSVDHVLHKQLLCSPLFKKEAGSPIMAFPTALYAAKAALMSTNQGPAGTGG
IEAGLPSDQSESGSSTAGDDDQLETADIAFQIKEQLLKHNIGQRVFGHYVLGLSQGSVSE
ILARPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPETGSDDA
IKNILEQAKKEIQSQRGGDIKSSLGSPSGRSSNGADSSSDDTIKNILEQARREMQAQQQA
LMEMEVCGRASATSAGPQVKRLGLPEPSKGLPLPTFIKQEEGGTVTMCMANPISSPQTPL
SVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGGGSSQPFTSVSPSLS
SSSSSGPSALPRLENGECLPNSEEASAAEEDTGSGMMQSVEVKVESDVSVSGESTGRGLA
YYPSYIPRTLKPTVPPLTPEQYEMYMYREVDTIELTRQVKEKLAKNGICQRIFGEKVLGL
SQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQGLNQLPSQTQPTSQDKSPVTA
QSSPSPPPSPEESHPSPLVEPVSLTLESSKENQQPEGLVNPHPEGGKSTPSLLSLHQPHT
PLGIQELVAMYPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWH
KLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSTGSDSDSPSASSEC
VSPALVSIDLCPYSQVKKPRVVLGAEEKDALRKAYLLEPYPSQHTIEILASQLNLKTNTV
INWFHNYRSRMRREVLMEGLQDNDTDAEHHSYSPSATQSPTSDGDERGLLHPTGRTPHPI
LPLSANTSLPHVKQEASEGEEEEREGFNGQSKIQCFSMGVQFPQLKTEHGDLMVGCQEPH
LAPHYIQSLRQEEGMSSQAQGLFHGELSLDGPQRASQSRHEGDNSSKSFVDPVSFKASSE
PCRSSLEVSLNSPSAASSPGLMMSVSPVPSSSTPISPSLPNPPTTSTNHSLDPNPLPPIQ
SPKPNKSVQRRTEKMANLNNIIHRLERAANREETLEWEF
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttgatctacggcggctt
cagagggagttaaactcagtagcgtctgagctggcagggcgacaggaagagagcgagcac
tcacacaagcacctggtggagctgagccgggagttcaagagaaatgtctcagaggaagtg
cgggagatggtggctcctgtcctcaagagtttccaagcccaggtggttgctctgaacaag
cgcagtaaggaggcagagtctgcattcctgggaatctacaagcagcttatcgaagcccca
gacccagctcctgtgctggaggccacacacaccctggaggagaggctgcagcagctgcag
agttcggctccagacagtgaggccctggtcagggaggtcagcaggcactggaggagacac
ctggagtgccttaacaagccagacgacacagaggacggcccagcagcagcgtcaggagct
gtggaggcatcgagccggaccgcctatgggatgactcccaaaagcaaacaggccttcagg
gccacatgctcacctcagcagaaccaccagatccagagtcagacagaggggaaggccgaa
gacgcagataccactctggccgacagactgggtgaggccgaggagaggatcaaagtgctg
cattcatctctgagcacagcccagacagacctgctggacctgcggtgtaaatacgaccag
gagaaggccaacaaggtagaggaggtcagcgtgatcatgatgaaccttgagaaggcgaac
cagaaagcggagattgcccagaggcaggtggaaaggctaaaggagcagctggccagtgcc
cggagcaccaccccaggcagctataatccaccagagggcactagtggggagagggatgag
aagggtggtgtgttgtcatccaagttggaggctaagctgattgctaaagaccgtgagatc
ctcaggctgttggagaacgtacagagactgcagttcgcactacaggaagtccaggacacc
tcagccaatcaggtcatatcgctggaacaccagctggcctataaaacagaagctattgag
agattagaaactaaactgcaatcccagatggactatgacgagattaaaacagatctcagt
atcctgaaggtaatgaagttggcctcagcgaatggtagctcatcccaggaatctgccaag
gctgcagaggctcttttgctggacaaagaggcctttcttccctctcacaaatacctgatg
gataaggccagagtcttacacaacaatgatgaggaccaatcggaggagtcaggcagagag
gggggcaggcccacagggtccttcttctcagtctcccaggtggatgtgcgtacctcggcc
agccctggtcctcccaccatggaagtctcctcctctagctacgacctcccccgccccttt
tctgtgtccccctgctcagggggcaggctgtctgtggaccacgtcctccacaagcagctc
ctctgctccccacttttcaagaaggaagccggcagccccatcatggccttccccaccgcc
ctgtacgcagccaaagccgccctaatgtcaaccaatcagggacctgcaggaactgggggc
attgaggctggcctgcccagcgaccaatcagagagtgggagctccactgcaggcgatgat
gaccagttggagacagcagatattgccttccagatcaaagagcagctgctgaagcacaac
attggccagcgtgtgtttggtcactacgtgctgggcctatcacagggctcggtcagtgag
atcctggcccggcccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatc
aagatgaaacagttcctgtctgatgagcagaacattctggccctcagaaccatccaggtc
cgacagagagggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgcc
atcaagaatatcttggagcaggccaagaaggagatccagtcccagagaggaggtgacatt
aagtcgtccctgggcagcccctcgggcaggagcagtaacggggcagacagcagctcagac
gacaccatcaagaacatcctggagcaggccaggagggagatgcaggcgcagcagcaggct
ctgatggagatggaggtctgtggcagggcctctgccaccagcgctgggccccaagtgaag
cgcctggggctccctgagccctccaagggcctgcccctacccaccttcatcaaacaggag
gaggggggcacggtgactatgtgcatggccaaccccatcagcagcccccaaacccccctc
agtgtcctctcccctgccgccttcgttcagaacatcatccgtaaagtcaagtcagagatc
ggcgaggcagggacttacttcgaccaacactggtccgtggagcgggggcccataggcatg
gtgggtggcgtagggggcggcagctctcagcccttcacctcagtgtctccctccctgtcc
tcttcctcgtcctcgggcccctcggccctgccccggttggagaatggagagtgtctgccc
aacagtgaggaggcgtctgcggccgaggaggacactggctcggggatgatgcagtctgtg
gaggtgaaggtggagtcagacgtgtcagtgagtggagagtcaactggccgtggcctggcc
tactacccatcatatatcccccgcaccctgaagcccaccgtgccgcccctgacaccggag
cagtatgagatgtacatgtatcgcgaggtggacaccatcgaactcacccgacaggtcaaa
gagaagctggccaagaatggcatctgtcagaggatctttggtgaaaaggtgctgggtctg
tctcagggcagtgtgagtgacatgctgtctcggcccaaaccctggagcaagctgacccag
aaaggcagggaaccctttatccgcatgcagctgtggctgctggatcagctgggacaagga
ctcaaccagctccccagccagacccaacccacctctcaagataaaagcccagtgacggcc
cagtcgtcgccctccccgccccccagcccagaggagagccaccccagcccgctggtggag
cctgtcagcctgaccctggagagcagcaaggagaaccagcagcctgagggcctggtgaac
ccccacccagagggagggaagtccacccccagtctgctttcccttcaccagccccacacc
ccgctgggcatccaggagctggtggccatgtacccagagttggacacatacgctatcacc
aagaaagtcaaggaggtactgacagacaacaacctagggcagcggctgtttggggagagt
atactgggcctcacccagggctcagtgtcagacctgctctccaggcccaagccctggcat
aaactcagcctcaaaggcagggagccttttgtccgcatgcaattgtggctcaacgacccg
cacaatgtggacaagctgagggacatgaagaagatggagaagaaagcctatctgaagcgg
cggtatggactgctgagtaccggctcagatagtgactctcccagcgccagctctgagtgt
gtgagcccggccctggtctccatagacctgtgtccctacagccaggtgaagaagcccagg
gtggtgctgggggctgaggagaaggatgctctgaggaaggcctatctcctggagccatac
ccatcccagcacaccattgagatactggcctcccagctcaacctcaaaaccaataccgtc
atcaactggtttcacaactataggtccaggatgcgacgggaggtcctcatggagggtctc
caggacaacgacacggatgcagaacaccacagctactctccctcggcgacacagagcccc
acctcagacggggatgagagggggctgctgcaccccactggacgcaccccccaccccatc
ctccccctcagcgccaacacatcactgcctcatgtcaaacaggaggccagtgagggagag
gaggaggagagggaaggcttcaacggacagtctaagatccagtgtttctctatgggcgtc
cagttccctcagttgaaaacggagcatggggacctgatggtcggctgccaagagccccac
ctggctccacactatattcagagcctgaggcaggaagaagggatgagtagccaggctcag
gggctcttccatggggagctctccctagatggcccccagagagccagccagtccagacac
gagggtgacaactccagcaagtcttttgtagacccagtcagcttcaaggcatcatcggag
ccctgtcgcagcagcctagaggtctccctcaactccccctccgctgcctcctcacccggc
ctcatgatgtccgtctcccctgtcccatcttcctctacacccatctccccatccctgccc
aacccacccaccacaagcaccaaccacagcctggaccctaaccccctgcctcccatccag
agccccaagcccaacaagagtgttcagagacgcactgagaaaatggccaacctcaacaat
atcatccataggctggaaagagcagctaaccgggaggagaccttggagtgggagttttag
DBGET
integrated database retrieval system
