Oncorhynchus kisutch (coho salmon): 109878334
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Entry
109878334 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109878334
04082 Neuroactive ligand signaling
109878334
04519 Cadherin signaling
109878334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109878334
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109878334
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
109878334
NCBI-ProteinID:
XP_031654014
Ensembl:
ENSOKIG00005010038
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All DBs
Position
LG19:58935379..59017549
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AA seq
549 aa
AA seq
DB search
MCVLLTRIKTVTMGKLRKNHFGILTFSLFFTFICCAQSAKDLRDPSNMPLVKDTVDRLMK
GYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIALNL
TLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLR
RYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLVSKNVVFS
TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTM
TTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKL
AVVNNEKLRPDPNKWMVGNVVQRDDALYARMKQREIDAYDTMWDPIFVDDAALGLGEQRN
KMTASLTDDNILFGSLEMKNEMGGVPSELSRSLGAGGLGDPRNTMLAYDSSTLQYRRAAM
ARQNYGGGPHSALERHATQKKSRLRRRASQLKVNIPDLADVNSIDKWSRMIFPTVFSFFN
VIYWLYYAH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgttctcctcactcgcatcaaaactgttacgatggggaagctcaggaaaaaccac
tttggaattttaacgttttcgttattttttacttttatctgctgtgcgcaaagcgccaaa
gatctgagggatcccagtaatatgccgctggttaaagacacggtcgacagactgatgaaa
ggctacgacattcggttgaggccagattttggaggtgcgccggtggcagtggggatgaat
atagacatagccagcatagacatggtgtctgaagtcaatatggactacacgttgaccatg
tacttccagcaggcctggcgggacaagcgtctgtcctactctgagatagccctcaacctg
acgttggataacagggtagccgactcgctctgggttcccgacacctacttcctcaacgat
aaaaagtcctttgtccacggcgtcacggtcaagaacagaatgatccgactgcatccggac
ggcaccgttctctatggactccggatcacaaccacagcagcctgtatgatggatctgagg
cggtatcctctggacgaacagaactgcacactggagatcgagagctatggctacaccact
gatgacattgagttctactggcgagggggagatggagctgtgtctggggtggagagaata
gagctgcctcagttctccatcgtggactacaagctggtctccaagaacgtggtcttctct
acaggttcctacccccgtctgtctctgagcttcaagctgaagaggaacatcggctacttt
atcctccagacctacatgccctctatcctgatcaccatcctgtcttgggtctccttctgg
atcaactatgatgcctccgctgccagagtggctctgggtatcaccacggtgttgaccatg
accaccatcaacacccatctgagagagacgctccctaagatcccctacgtcaaggccatt
gacatgtacctgatgggctgcttcgtgttcgtcttcctggccctgctggagtacgccttc
gtcaactacatcttcttcggacgggggccccagaggcagaagagggccgccgagaaacta
gccgtcgtcaacaacgagaaactccgacccgaccccaataagtggatggtgggaaatgta
gttcagagagatgatgctctgtatgccagaatgaaacagagggaaattgacgcgtatgac
acgatgtgggatcccatctttgtggacgatgccgcattaggactaggcgagcaaagaaat
aagatgaccgcctccctgactgatgacaacatcctgtttggttccctggagatgaagaac
gagatggggggtgttccttctgagctttccaggtccctgggcgctgggggtctgggtgac
ccccgcaacaccatgctggcctacgacagctccacgctgcagtaccgcagggccgccatg
gcccgccagaactacggcggcggacctcacagcgccctggagcgccacgccacccagaag
aagtcccgcctacggagacgggcctcgcagctcaaggtcaacatccctgacctggctgat
gtgaactctatcgacaagtggtccaggatgatcttccctaccgtgttctccttctttaac
gtgatctactggctctactacgctcactaa
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