Oncorhynchus kisutch (coho salmon): 109878343
Help
Entry
109878343 CDS
T09179
Name
(RefSeq) vesicular integral-membrane protein VIP36-like isoform X2
KO
K10082
lectin, mannose-binding 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109878343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109878343
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oki04091
]
109878343
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
109878343
Lectins [BR:
oki04091
]
L-type lectins
109878343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Motif
Other DBs
NCBI-GeneID:
109878343
NCBI-ProteinID:
XP_020326193
Ensembl:
ENSOKIG00005013403
LinkDB
All DBs
Position
LG19:59335392..59344571
Genome browser
AA seq
345 aa
AA seq
DB search
MVSFPGSKMRGVGTFISRPLPFLLLHFTLLKCDITDGNVEHLKREHSLMKPYQGVGSSPS
SQWDFWGSTLVTSSYVRLTPDERSKQGSIWNTVPVHLKDWEMHVQYKIHGSGKKNLHGDG
IAIWYTKERLHPGPVFGNQDHFVGLALFVDTFRNDLHGMDRSFPYISAMVNNGSLPYDHG
NDGRTSELGGCSSEIRNKDHDTYLAIRYSKGRLTVMIDIDDKNEWKECIDIGGVRLPTGY
YFGASAATGDLSDNHDIISMKMYQLMVEHAPDEDSLDWTKIEPSVSLLKSPKDNIDDPTG
NFRSTPLTGWKVFLLLLCALLGIVVCGVVGAVVFQKRQERNRRFY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttcccaggcagcaaaatgagaggcgttggtacatttatcagcagaccactg
cctttcctattacttcactttactctattgaaatgcgatataacagacggcaatgtagag
cacttaaagcgggagcattcgctcatgaaaccgtaccagggtgttggaagcagcccatcc
agtcagtgggacttctgggggagcacgctagtcaccagctcatatgtgcgcctgacacct
gatgagagaagtaaacagggatccatatggaacacagtgcctgttcatctgaaagactgg
gagatgcacgtgcagtacaagatccacgggtcggggaagaaaaatctccatggagacggc
atcgccatctggtacacgaaggagagacttcatccaggcccagtctttggaaaccaagat
cattttgttggcctggctttatttgtggataccttccgcaatgatctccatgggatggat
cgttcctttccctacatctctgccatggtgaataatggttctctgccctatgaccatggg
aatgatggacgtacctctgaactgggaggctgctcttctgagatcaggaacaaagaccat
gacacctacctcgccattcgctactccaagggcagactcacggtgatgattgacattgat
gataagaatgaatggaaagagtgcattgacatcgggggtgtccgtctccccacggggtac
tactttggggcttctgctgctacaggagatctctctgataaccatgatatcatctctatg
aagatgtatcaactgatggtggaacacgcacctgatgaggacagtctggactggaccaag
attgagccaagcgtcagcctgctgaagtcccccaaagacaacattgatgatcctactggt
aacttccgaagcacacctcttactggctggaaggtcttcctgcttctgctgtgtgctcta
ctgggaattgtagtttgtggtgttgtaggggctgtagtctttcagaagcgccaggaaaga
aacaggaggttttactga
DBGET
integrated database retrieval system
