Oncorhynchus kisutch (coho salmon): 109878361
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Entry
109878361 CDS
T09179
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109878361
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109878361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
109878361
NCBI-ProteinID:
XP_020326208
Ensembl:
ENSOKIG00005048465
LinkDB
All DBs
Position
LG15:complement(28195701..28203253)
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AA seq
1019 aa
AA seq
DB search
MAHRLVSTRWTPLTGLVGCLLVCNCVVDLVLAQIRYSIPEELEHGAFVGNIADDLGLDVA
KLSSRRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPNFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSSNEH
FVLNIQTRNDGSKFAELVLETPLDREQQKTQEMVLTSVDGGSPERSGTALITITVLDAND
NVPVFDQSVYRASLVENARRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQ
YTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDSPPGTVIAVISVMDRDSGENGNVHCQIPSNVPFQLHSSFKNYYTLMTSEFLDREA
FSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPLYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIHGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQA
QDAGFPPLSSNITVNVFVLDQNDNSPVIVSPLPKNGTVATEVVPRSVDAGYLVIKITALD
ADAGQNSRISYQVLQATDPGLFSVALYTGEIRTIRRIVDKDATRQRLVILVKDNGQPPLS
ATVSILLSVVENVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDKDTLSGYSLPPFACCCGGYQPEPPPEVFKKSNLNLQISTGAKVPTNCMEVNGSGTLS
QAYCYKVCLTPESGKSDFMFLKPCSPSRTSRNNETKGADNFAWSAHNRSASANNNSRATT
PNELKQPNTDWTLPKNQKSSLKSYNSINMDGTLMRKAMHGDPENYMTPMTGQYWTWGTHM
RDYKMSPPATGPPPCCCTPRCTPPPQQQPQPQQPQQPPLPPHPHPHPHPQPPPDYQHNVY
IPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFIHNYEPRTEAAAAVINNDLYND
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaggctcgtgagcacccggtggacaccgttaaccgggctggtggggtgcctg
ctggtgtgcaattgtgtggtagacctggttctcgcacagattcggtactctatccccgag
gagttggagcacggagcttttgtcggtaatatcgccgatgacctgggcttggatgtagcc
aagctatcctctcgtcggtttcggattgtatccggggccaaaaaacaatacttagaagtg
aatctggaaaacggtattttgttcgttaacgagaagattgaccgcgaggaactgtgtgaa
cggagtccgagctgcttcttgcacttgcaagtggtgatcgagaatccgttagaactgtac
cgagtggaggtggagattttggatgtgaatgacaactctcccaatttcccatggagcgag
tttaatctggagattacagagtcggcggcgcccgggtctcggttcccgttggaaagtgcg
caggaccaggacgtgggcaccaattcgctccgctcctaccagctgagctccaacgaacac
tttgtgctgaacatccagacgcgtaatgatgggagcaaatttgccgagctagttctggag
accccactggaccgggagcagcagaagacgcaagagatggtgctcacatctgtggacggg
gggtcgcctgagcgctcgggcacagctctcatcaccatcacggtgctggatgccaacgat
aacgtgcccgttttcgaccagtctgtttaccgggcgagcctggtagaaaacgcacggaga
gggacattagtgctgaagctaaatgctactgatttggacgagggtgcgaacggggaggtg
tcctatgcattcagtgggcacgcaccactcaaagtgcgcgagctgttcagcgtagaccag
tacacaggtgagatccgagtgaaggggattgtggactatgagaaagcgagtgtgtatgag
ctgtatgtgcaggctaaagacaggggtccctccgcagtggccgtgcacagtaaggtactg
gtggatatcttagatgtgaatgacaacgcgccggaagtcatcctcacctccgtgtccacg
cctgtccaggaggattcgccaccgggaacggtgatagccgttataagcgtcatggaccgg
gactcgggagagaacgggaatgtgcactgccagatccccagcaacgtccccttccagctc
cactcttcttttaagaactactacactctgatgactagtgagtttctcgacagagaagct
ttctccgagtacaacatcaccctcacggcccgggacctgggctccccgtcgctctccacg
aggaaaaccatcctcgtccaagtgtctgacattaacgacaaccccccgcgcttcgcccag
ccattatacaccgtttatgtgactgagaataacgccccgggagcatccatttgctcagtc
actgctttcgaccccgattctaatcagaacgcctatctgtcctactcgattctagagggt
cagatccatggcatgcccgtgtccacttacgtctccatcaactcggacaacggaaacatc
tacgcgctgcgctcctttgactacgagcagctaaggaactttcagatacgggtgcaggcg
caggacgccggtttccccccactcagcagtaatatcacagtaaatgtgttcgtattggac
cagaacgacaactctccggtcatcgtctcccccttgcccaagaacgggactgtagcaaca
gaggtggtcccgaggtcagtggatgcggggtacctagtaatcaagatcactgcgctagat
gcggacgcaggacagaactcccgcatctcctaccaggtgctccaggctacggacccgggg
ctgtttagtgtcgccctctacacaggagaaatcaggacaattcgccggatcgtggataag
gacgctacgaggcagagactcgtcatcctggtcaaggacaacggccagccgcctctctcc
gccaccgtctccatcctcctctccgtggtcgagaacgtgcccgagtccctgtctgatttc
ggcgacctcactctgagcccgcagcccccctccaacctcgccctctacttgatcgtgtca
ctgagcaccatctcgctaatcttcctggtggctattattgtgctggctgcggtcaaatgt
tacaaggacaaagacacactcagcgggtacagcctccctcccttcgcctgctgctgcggg
ggctaccagccagagccaccccccgaggtattcaaaaaatctaacctgaacctgcaaatc
tccaccggggctaaagtgcctaccaactgcatggaggtaaatggcagcgggactctgtcc
caagcctactgctataaagtgtgtctgacccccgagtcaggtaagagtgactttatgttc
ctaaagccgtgcagccccagcaggacctcgaggaacaacgagacaaagggggcagacaac
tttgcttggagcgcgcacaaccggagcgcatccgcgaataacaattccagagccaccact
ccgaatgagctcaagcaaccaaacaccgactggaccctcccaaagaaccagaagtcctct
ctgaaaagctataactctatcaacatggacggcactctgatgaggaaggccatgcatgga
gacccagagaactacatgacacccatgacgggccagtactggacctggggcacccacatg
agggactacaagatgtctcctcctgccactggccctcctccttgctgctgcacccctcgg
tgcacccctccaccccagcaacagccccaaccccagcagcctcagcaacctccactcccc
cctcatccccatcctcaccctcacccccagccacctccagactaccaacacaacgtgtac
atccctggcacgccgtcggctctgtgcacgctgaggccagcagccacccaccaccgcagc
gagctggatgtccacaactccttctccaccttcggcaagaagaggcgcttcatccacaac
tacgagccccggacagaagcagcagcagccgtcatcaacaacgacctatataacgattaa
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