KEGG   Oncorhynchus kisutch (coho salmon): 109878409
Entry
109878409         CDS       T09179                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X2
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04114  Oocyte meiosis
oki04120  Ubiquitin mediated proteolysis
oki04218  Cellular senescence
oki04310  Wnt signaling pathway
oki04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109878409
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109878409
   04340 Hedgehog signaling pathway
    109878409
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    109878409
   04218 Cellular senescence
    109878409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109878409
   03036 Chromosome and associated proteins [BR:oki03036]
    109878409
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     109878409
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     109878409
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C EIF3I DSE1_N Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 CFAP251_N F-box-like Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F PAC11 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_SPT8 ASA1 Beta-prop_DCAF4 NBCH_WD40 TRM82_WD Beta-prop_IFT140_1st WD40_like F-box Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513
Other DBs
NCBI-GeneID: 109878409
NCBI-ProteinID: XP_020326223
Ensembl: ENSOKIG00005004407
UniProt: A0A8C7CVL0
LinkDB
Position
LG15:complement(28312519..28328070)
AA seq 529 aa
MEPEMEDNTLELMNTAVMESQNHVDDLSPKKTTILTKLSNGPVMTGSRKRPSEGNCDKEK
EQCIALFDQWSETDQVEFVEHLISHMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAE
NILSFLDAQSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFK
NRTTEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKI
ISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVL
NTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDD
KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG
ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSG
RVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaacacgttggaattaatgaacacggcagtcatggagtcc
cagaaccacgtagacgacctctccccaaagaaaaccacaattctcaccaagcttagtaat
ggtcctgtaatgacaggctctcgtaagcgtccgtcagaggggaactgtgacaaggagaag
gagcagtgcatcgccctgtttgaccagtggtctgagactgaccaggtggagtttgtagaa
cacctcatctcccatatgtgccactaccaacacggccacatcaactcctacctcaaaccc
atgcttcaacgtgacttcatcacagcactgccagcccagggtctggaccacatagcagag
aacatcctgtcgttcctggacgcacagtctctgtgctccgcggagctggtgtgtaaggag
tggcagagggtgatctcagagggcatgctctggaagaaactcatcgaacgcatggtccgc
acagaccccctctggaaaggcctgtcagagaggcaccagtgggagaagtatctgttcaag
aaccgaacgacagaagtcccgcccaactcctactaccactccctctaccccaagatcatc
caggacatagagactattgaggctaactggcggtgtggcagacacaacctacagaggatc
cagtgtcggtcagagaacagtaaaggagtctattgcctccagtacgacgacgataagatc
atcagtggccttagagacaactccataaagatctgggacaagcagtctctggagtgtctg
aagatcctgacaggtcatacaggctctgtgctctgtctgcagtatgatgagagagtcatt
gtcactggctcctccgactccactgtcagggtgtgggacgtgacgtcaggtgaagtactg
aacactctgatccatcacaacgaggcggtgctccacctgcgcttctgcaacggtctgatg
gtgacgtgttccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatc
agcctccggcgcgtcctcgtggggcaccgagccgccgtcaacgtggtcgacttcgacgac
aaatacattgtgtcggcgtctggagaccgcaccattaaggtgtggagcaccagtacgtgt
gagtttgtgcgcactctaaacggacacaagcgaggcatcgcctgcctgcagtacagagac
agactagtggtcagcggctcctcagacaacaccatacggttatgggatattgagtgtgga
gcgtgtttgcgggtgttggagggtcatgaggaactggtccgctgcattcgcttcgacaac
aagaggatcgtcagtggtgcctacgacggtaagatcaaggtgtgggatctgcaagctgct
ctggatccacgagccccagccagcaccttgtgcctgcgcacactggtggagcactcggga
cgtgtgttccggctgcagtttgacgagttccagatcatcagcagttcccatgacgacacc
atcctcatctgggacttcttgaatgtatcgaccaatggccagtcagagggccggtccccc
tcacggacctacacctacatctccagatag

DBGET integrated database retrieval system