Oncorhynchus kisutch (coho salmon): 109878435
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Entry
109878435 CDS
T09179
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109878435
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oki04031
]
109878435
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
109878435
GTP-binding proteins [BR:
oki04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
109878435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
109878435
NCBI-ProteinID:
XP_020326254
Ensembl:
ENSOKIG00005000178
LinkDB
All DBs
Position
LG1:71046652..71052593
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AA seq
299 aa
AA seq
DB search
MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGSGGVSGNNNSSSSSSKGNSLKRSKSFKPPPSPPKSSSSKSNCNIT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaag
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatattccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcgtttgatggcattgaccgctggatccgggagatcgatgagcatgcc
ccgggggtgccccgcatcctagttggcaaccggctccacctggcctttaagaggcaggtg
cccacggagcaggcccgcgcatacgccgagaagaacggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaaccgagtgttcagcctccaggacctgtgt
tgccgctccatcgtctcatgcacccccgtccacctcattgacaagctgcctctccccgtg
gccatcaagtcccacctcaagtccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcagcggcggcgtgagcggc
aacaacaacagcagcagcagcagcagcaagggaaacagtctcaaacgctcaaagtccttt
aaaccgcctccgagcccccccaagagtagcagcagcaaaagtaactgtaacatcacctag
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integrated database retrieval system
