Oncorhynchus kisutch (coho salmon): 109878628
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Entry
109878628 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109878628
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Others
Others
109878628
Endosome - Golgi transport
109878628
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109878628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
SUKH_6
EIF3I
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
109878628
NCBI-ProteinID:
XP_031693727
Ensembl:
ENSOKIG00005014836
LinkDB
All DBs
Position
LG12:56547279..56807583
Genome browser
AA seq
2990 aa
AA seq
DB search
MASEETPGAGRPAGQVDGAAAVSLNPGIPIRGIKMKFAVLAGLVEVGEVSNRDIVETVFN
LLVGGQFDLEMNFIIQEKDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTDT
ALINLVLDRVAHTDSMIADLMVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKLL
SVLRSMAHRNGPDSFFSFPGKSAAAIALPPIAKWPYQSGFTFHTWLRMDPINNINVDKDK
PYLYCFRTNKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTIVHVYNRW
KNSEISCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEAL
SAAQILAIYQLGPGYKGTFKYKAESDLLFAEHHKTLLYDGKLSSGISFSYNPRATDAQLC
LESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSD
ELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRSVLDIVLAF
ARYLSNLQNGVLLLKQLCDHILFNPAIWIHAPAKVQLVLYTYLSTEFISTVTIYNAIRRV
GTVLQVMHTLKYYYWVVNPQDRSGVTPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDYG
VKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASN
SEGIRVQALKVLGYFLKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEIL
TEQICTQVIHKQHPDPDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFN
NSKDNRRSLLQCSVWQDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRV
WVDTLSITHSKVTFEQHKENLARMFRQYQRLGSEGDAAGIRTISGASRDSEILGQLRTNR
DQGEETAPSTVIELTIDPEGVPQNQESPNTTPPSATSASASTPSPPEREGDRSQRGQAPI
TVSNMLARAEEEEEEELQQVQNQISEDQRGGAGDRAEATPQETEAKLTGDKVSSKTVEAM
AETETATDKTDEAAAASTAETDEATRPETDDAKVAKSDAKTSDTDKVVRPQTDGEKGSET
HSCKTANVLMSEDSLNEPKESELAKQPEEQVSAAISACQQGSVAEGSAVVASVQSVSDQV
QPSSTDDSMEESSFVSAAGGEEEEKEEEEVKTEEVVVEEEKIEEVKAEEIKTEVKTEKEK
EEEIVAEVTKSAVESRATPPASVPEESQTQPPEMEEIDLNPSAPGTDPTSTEPARQPLES
TTSPPTALEAILPPAAVRATVSKSDTSQAVAPAEAPSTKAVQPEAPQASGTTEAPSSRTE
TSPKVATATAVEAGKEGPGSATKTKEIHIARLDVSSVASDTERLALKETTPEVPQGDAAP
AGASGGQASESSSSARSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDF
VNSTENVVFVHNTVHLISQVVDNLIMACGGILPLLSAATSSSHDLENIEPSQGLSVEASV
TFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQSLRLVCAMAVRNCLECQQQSHF
KPSQDSARCQQAVHSLMGAAKSMPAQSPVDVVTGGMSPIRDMDRLLQEMDINRLRAVVFR
DIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNDKKLPQRSQSARSTDSNTVSGGPDL
ESSVSLRRRDSGIGDDHSSVAPSEADTTAQGPDAVSEALSTLSSEVRGHRDNPTADARGG
KNVKDILRSLVSAPADDIMVDPSLLPPAFLGAAMGNNPNQFRSFDRSVRVAPKKVGGAPS
PGSSTPVPSATAAVGAAGTPVNNVAVVSTGDASQSTTAEAAAGSASTNLPSVPTLSPMTR
DTAPSMSISERLEHALDKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSS
SVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRA
EDIHKHAEFESHCAQYSAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILTDKHGAW
GSSAFSRPREFWRLDYWEDDLRRRRRFVRNPFGSTHSKATLKAAAEHVVPGINAPEEDIL
KGKQSIRSQAMGNQNSESEILLDGDDDTLSSLEEKELENLTGPVNMSTSAQLVAPAVVVK
GTLSITASELYFEVDEDEASFKTIDPKILTYTEGLHGKWLFTEIRAVFSRRYLLQNTALE
XFMANRTAVMFNFPDAGTVKKVVQCLPRVGVGTNFGLPQTRRISQASPKQLYKASNMTQR
WQRREISNFEYLIFLNTISGRTYNDLNQYPVFPWVITNYDTGDLDLTLPSNYRDLSKPIG
ALNPKRAAFFNDRYESWEDDQVPKFHYGTHYSTSSFTQMWLLRIEPFTTMFLNFQGGKFD
HADRTFSSVSRAWRNCQRDTSDVKELTPEFYYLPEMFVNANNYSLGVMEDGTVVSDVELP
PWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRSLNVFYYLTYEGTIN
LSSITDPMLREAVEAQIRSFGQTPCQLLIEPHPPRSSAMQVSPLMFTEQMQQDVIMVLKF
PSNSPVAHVAANTQPGLATPAIITVTANRLFAVNKWHCLAGHQGSSVQDQQYQLPVEIDP
LIASNVGTHRRQITDLLDQSIHIHSQCFIITADNRFILLCGFWDKSFRVYSTDSGKLTQI
VFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGENPGTEFVTPRAIL
TGHDCEVTCASVCAELGLVISGCREGPCLIHSMNGDLLRTLEGPGGCSQPRLIQSSTEGH
AVVYYDKGHFCFFSINGKLLGHMEVEENIRAMLLSRDGQYLLTGGDGGVLSVWQVHNLKQ
MFTYPGCDAGIRSMAMSNDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8973 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacgcctggtgctgggcgaccagccgggcaagttgatggagctgcg
gcggtgtcgctcaaccctgggatcccaatccgaggaatcaaaatgaaattcgctgtcctc
gccggcctggtggaagttggggaagtttccaaccgggacattgtggagaccgtcttcaac
ctgttggtggggggccagtttgacctggagatgaacttcattatccaggagaaggacagc
attgtgtgcatggtggagctgctggacaagtgtgagcccacttgccaggcggaggtgtgg
agcatcttcacggctatcctgaagaagagcgtgaggaacctgcaggcctgcaccgacacg
gccctcatcaacctcgtcctggaccgcgtggcccacactgacagcatgatcgcagacctg
atggtggacatgctaggagtgctggccagctacagcatcacagtcaaggagctgaagttg
ttcttcagcaaactgcaaggagagaaaggccaatggcctccccatgcggtgaagctgctg
tctgtcctgaggagcatggcccaccggaacggacctgactccttcttcagcttcccaggg
aagagtgctgctgctatagctctgccccctatagccaaatggccgtaccagagtggattc
accttccacacgtggctccgcatggatccaatcaacaacatcaatgttgacaaggacaag
ccttacctgtactgttttcgcaccaacaaaggtctgggatactctgcacactttgtgggc
ggctgtttgattgtgacctcgttaaagtccaaggggaagggattccagcactgtgtgaaa
tatgacttcaaaccacagaagtggtacatggtgaccatcgttcacgtctacaaccgctgg
aagaacagtgagatcagctgctacgtcaatggagagctcgcctcctacggagaaattacc
tggttcgtcaacaccagcgacactttcgacaagtgtttcctgggttcgtcagagacggcg
gacgccaaccgtgtgttctgtggtcagatgggggcggtgtatctgtttggcgaggccctc
agtgcagcccagatcctggccatctaccagctggggcctggttacaagggcacgttcaag
tacaaggctgagagtgacctcctgtttgctgagcaccacaagaccctactgtacgacggc
aagctgtcctctggcatctccttctcctacaacccccgcgccactgacgctcagctgtgc
ctggagtcctcccccaaggacaacgcctccattttcgtccactcgccacatgcactcatg
ctgcaggatgtgaaggctgtggtgacccactcggtccagagtgccatccactccatcggg
ggagtgcaggtcctcttccccctgtttgcacagctggatcacctccagcacaccagcgat
gaactggacacctctgtctgttgcactttgctgtcctttgtgatggagctgctgaagaac
tctgtggctatgcaagagcaggtcctggcctgcaagggcttcctggtcatcggttacacc
ctggagaagtcttccaaggtgcatgttactcggtccgtgctggacatcgtgctggccttc
gcccgttacctcagcaacctgcagaacggcgtcctgctgctcaagcagctgtgtgaccac
atcctgttcaaccctgccatctggatccatgcccctgccaaggtgcagttagtgttgtac
acctacctgtcgactgagttcatcagcacggtgaccatctacaacgccatccgcagggtg
ggcacggtcctgcaggtcatgcacacgctcaagtactactactgggtcgtcaacccccag
gaccgcagcggagtcacgcccaagggcctcgacggtccgagacccaatcagaaggagatc
cactctctcagagcctttctgctgctgtttgtgaaacaactcataatgaaggattacgga
gtgaaggaagatgagcttcagagtattctcaactacctactcaccatgcatgaggacgac
aatctaatggatgtgcttcagctgctggtggctctgatgtcggagcatcacggctccatg
gtgcaggcctttgatcagcgcaacggagtacgggccatttacaagctgctggcttccaac
agtgaaggaatcagagttcaggcactcaaagtcttgggctacttcctcaaacacttgccc
gctaagaggaagtcagaggtcatgctgggtcacgggctcttctccctgctcaacgagcga
ctgatgctccactccaaccagttcagcatgacaacctacaacgtgctcttcgagatcctg
accgagcagatctgcactcaagtgatccataaacagcatccggaccccgactccaatgtg
aagattgtcaacccgcaggtcctgaaggtgatcgctgccctgctgaagaactctcccctc
tccccagagagcatggaggtgcgcagggtcttcctgtcagacatgatcaaactgttcaat
aacagcaaagataacaggaggagcctgctgcagtgctcggtgtggcaggattggatgctc
tctctgtgcttcatcaaccccaagagcagcgaggagcagaaggtcactgagatggtgtac
gccatcttccgcatcctgctctaccacgccatcaagtacgagtggggcggctggcgcgtg
tgggtggacaccctgtccatcacccactccaaggtgacctttgagcagcacaaggagaac
ctggcccgtatgttccgtcagtaccagagactgggctccgagggcgatgcagctggtatc
cggaccatttccggggccagccgagactctgagattctgggtcagctccggaccaacagg
gatcagggggaggagactgccccctccaccgtgatcgagctcaccattgacccagagggg
gtcccccagaaccaggagtcccccaacactacccctccctcagcaacctcagcatctgct
tccacccccagccctccagagagagaaggagatagaagtcagaggggtcaagcacccata
actgtgtccaacatgctggccagagctgaagaagaggaggaggaggaactacagcaggtc
cagaatcagatctctgaggatcagagaggaggtgctggtgacagagctgaagctactcca
caggagactgaagctaaacttactggggataaagtcagcagtaagactgttgaggccatg
gctgagacggagacagccacagacaagactgatgaagctgcagcagctagcacagctgaa
acagacgaagcgaccaggccagaaactgatgacgcgaaggtggctaaatcagatgctaaa
acatctgatactgacaaagtagttagacctcaaacggatggagagaaggggtcagaaacg
cacagctgcaaaaccgccaacgttcttatgtctgaagattccctgaacgaacccaaggaa
tcggaactggcaaagcaaccggaggaacaggtctctgctgccatctcggcctgccagcag
ggcagcgtggcggaggggtcagcggtcgtggcatctgtccagtcagtcagtgaccaggtc
caacccagctccaccgacgacagcatggaggaatcctcttttgtctccgccgctggtgga
gaggaggaagaaaaggaggaagaggaggtgaagacagaggaggttgttgttgaggaggag
aagatagaagaggttaaagcagaggagatcaagacagaggttaaaactgaaaaggagaag
gaagaggagattgttgccgaggtcacaaagtcagcagtggaaagtcgagcgacaccacct
gcttctgtacctgaggagagtcagacacaaccccctgaaatggaggagattgaccttaac
ccgtctgcaccaggcaccgaccccaccagcacagagccagcacggcagcctttagagtcc
acaacatcgccccctacagccctggaggccatactaccaccagcagcagtaagagccact
gtctctaaatctgacacctcacaggctgtagcaccagcagaggcccccagcaccaaggcg
gtccagccagaagccccacaggcctcagggaccacagaggcccccagcagcaggactgaa
acctctccgaaggtagccactgctactgctgtggaggcagggaaagagggccctggctct
gccaccaagaccaaagagatccacattgccaggctggatgtgtccagtgtggcctcagac
acagagagactggctctaaaggagaccacacctgaagttcctcagggcgacgcggctcca
gccggtgcctcaggaggccaggccagcgagagcagctcctccgctcgctccaccatgttc
cgtattccagagttccgttggtctcacatgcaccagcgcctgctcacagacctgctcttc
tccatcgagactgacgtgcagatgtggaggagtcactccactaagacggtgatggacttt
gtgaacagcactgagaatgtggtgtttgtccacaacacagtgcacctcatctctcaggtg
gtggacaacctcatcatggcctgtggaggcatcctgcccctgctttctgctgccacatcc
tcctcacatgatctggagaacattgagccgtcccagggtctgtcggtggaggcctcggtc
accttcctgcagcgcctcatcaacctggtggatgttctgatcttcgcctcctccctcaac
ttcaccgagatcgaggctgagaagaacatgtcctctggcggtatcctcagacagagcctc
cgcctggtgtgtgccatggctgtgaggaactgtctggaatgtcagcagcagtctcacttc
aagcccagccaggacagcgcccgctgccagcaagccgtgcacagcctcatgggagctgcc
aagtccatgcccgcgcagagccctgttgatgttgtgacaggagggatgtctcccatcaga
gacatggaccgtctgctacaggaaatggacatcaaccgcctcagagccgtggtcttcaga
gatatcgaggacagtaagcaggctcagttcttggccctggccgtggtttacttcatctct
gttctcatggtgtccaagtaccgagacatcctggagccccaaaacgacaagaaactcccc
cagcgcagccagtctgccaggagcacagacagtaataccgtctctggcggtcccgacctg
gagagcagtgtgtccctccgtcgccgagactctggcatcggggatgaccatagctccgtg
gcccccagcgaggcggacaccaccgcccaggggcccgacgccgtgtccgaggccctgtcc
accctctcctcagaggtcaggggtcacagagacaaccccacggcagacgccaggggcggg
aagaacgtgaaggacatcctgcgcagcctggtctcggcgcctgctgatgacatcatggtg
gaccccagccttctgccgccggccttcctgggagctgcgatgggaaacaatcccaaccag
ttcagatcctttgacagaagcgttcgggtggcgcccaagaaggttggcggggctccgtcc
ccaggctcctccactcctgtcccatcagccaccgctgctgtgggggccgccgggacacca
gtcaacaatgttgccgtggtttccacgggcgatgcctcccagagcaccaccgctgaggct
gcagccggatcagccagcaccaacctgccatctgtccccacgctgtccccaatgacccgg
gacacagcccccagtatgagtatctcagagaggctggagcatgctctggataaggctgcc
cccctactgagagagatctttgtggactttgcccccttcctctctcgcaccctgctgggt
agtcacggacaggagctcctcatcgagggcaccagtctggtgtgtatgaagtccagcagt
tcggtggtagagctggtcatgctgctctgttctcaggagtggcagaactctatccagaag
aacgcaggcttggccttcatcgagctggtcaacgagggcaggctactaagccacaccatg
aaggaccacctggtgcgggtggccaatgaggctgagttcatcctgagccgtcagagagcc
gaggacatccacaaacacgctgagtttgagtcccactgtgcccagtactcggctgagaag
cgtgatgaggagaagatgtgcgaccacctgatccgagcggccaagtaccgcgaccacgtg
acagccacccagctcatccagaagatcgtcaacatcctgacagacaaacacggtgcctgg
ggaagctctgccttcagccgtcctcgggagttctggcgcctcgactactgggaggatgac
ttgaggcggcgccggcgcttcgtcagaaaccccttcggatccactcattcaaaggccacg
ctcaaagctgcagccgaacacgtggtgcctggcattaatgctccggaggaagatatcctc
aaaggcaaacagtcaatcagaagtcaggcgatgggaaatcagaactctgagagtgagata
ttgttggatggcgacgatgacactctatcatccttggaggagaaggaattggagaaccta
acaggccctgtaaacatgagcactagcgctcagctggtcgccccggcggtggtggtgaaa
ggaacgctgtccatcactgcatctgaactctacttcgaggtggatgaagatgaggccagc
tttaagacgatcgatccaaagatcctaacctacacagagggccttcatggtaaatggctg
ttcacagagatcagggctgtcttctccagacgttacttgctacagaacactgctctggag
natttcatggccaacagaactgcggtcatgttcaacttcccagatgcaggcacggtcaag
aaggtggtccaatgcctccctcgcgtgggggtgggcaccaactttggcctcccacagacc
aggcgtatctcccaggccagtcccaagcagctctacaaggcctccaacatgacccagcgc
tggcagcgcagagagatctccaactttgagtacctgatcttcctcaacaccatctctggc
cgtacgtacaacgacctgaatcagtaccccgtcttcccctgggtcatcacgaactacgac
actggagacctggacctcactctgcccagcaactacagagacctgtccaagcccattggt
gccctgaaccccaagagggcggcgttcttcaacgaccgctatgaatcctgggaggacgac
caggtgcccaagttccactacggaacccactactccacctcctctttcacccagatgtgg
ctgctgcgcatcgaacccttcaccaccatgttcctcaacttccagggagggaagtttgac
catgctgaccgcaccttctcctccgtgtcccgagcctggaggaactgccagagagacacg
tccgacgtcaaggagttgaccccagagttctactacctccctgagatgtttgtaaacgcc
aacaactacagcctgggggtaatggaggatgggactgtggtgtctgacgtggagctgccg
ccctgggccaagacccctgaggagtttgtacgcatcaacagactggctctggagagtgag
tttgtgtcgtgccagctgcaccagtggatcgacctgatctttggctacaagcagcagggt
cctgaggccaccaggtctctcaacgtcttctactacctgacctatgaagggaccatcaac
ctcagctccatcaccgaccccatgctcagagaggctgtggaggcacagatcaggagtttt
ggacagaccccatgtcagctgctcatcgagccacacccaccaaggagctccgccatgcag
gtgagcccgttgatgttcacggagcagatgcagcaggatgtcatcatggtgttgaagttc
cccagcaactctcctgtggcccacgtggccgccaacacccagccgggcctcgccacgccc
gccatcatcaccgtcaccgccaaccgcctcttcgccgtcaacaagtggcactgcctggcc
ggtcatcaaggctcctctgtgcaggaccagcagtaccaactgcctgtggaaatagacccc
ctgatagccagtaatgtggggacccaccgtcgtcagatcacagacctgttggaccagagc
attcacatccactctcagtgtttcatcatcactgcagacaaccgcttcatcctgctctgt
ggcttctgggacaagagcttccgcgtctattccactgactcagggaagctgacccagata
gtgtttggtcaccgtgacgtggtgacgtgtctggccaggtctgagtcgtacatcggaggg
gactgctacgtcctgtcaggctccagagacgccacgttactgctctggtactggaacgga
aaacacagcagcatcggagagaaccccggaactgagtttgtgacgcccagagccattctg
acgggtcatgactgtgaggtgacctgcgccagtgtgtgtgccgagctgggactggtcatc
agtggctgcagagagggcccgtgtctgattcattccatgaatggggacctgctgcggacc
ctggagggcccggggggctgctcgcagccccgtctcatccagtcctctacagagggccac
gccgtagtctactacgacaagggacacttctgcttcttctccatcaatggaaagctgctg
ggacacatggaggtggaggagaacatcagggccatgctgctgagtcgggacggacagtac
ctgctgacggggggagacgggggagttctgtctgtctggcaggttcacaacctcaaacag
atgttcacctaccctggctgtgacgcaggcatccgctccatggccatgtccaacgaccaa
aggtgcatcataaccggcatggcgtctggtagtatagtcctgttctacaacgacttcaac
aggtggcaccacgagtaccagaccagatactga
DBGET
integrated database retrieval system
