KEGG   Oncorhynchus kisutch (coho salmon): 109878675
Entry
109878675         CDS       T09179                                 
Name
(RefSeq) coronin-1A
  KO
K13882  coronin-1A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109878675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109878675
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109878675
   04147 Exosome [BR:oki04147]
    109878675
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Coronins
    109878675
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     109878675
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109878675
SSDB
Motif
Pfam: DUF1899 Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_4 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 DSE1_N PAC11 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Trimer_CC Beta-prop_EML WDCP Beta-prop_WDR75_1st Beta-prop_WDR41 NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N KIF21A_2nd ASA1 TRM82_WD bZIP_1 Beta-prop_HPS5 TSC22 BLOC1_2 DUF5798 DivIC Beta-prop_SPT8 DNAI3_WD MYCBP_helical DUF7310 Beta-prop_NUP159_NUP214 SOGA UbiJ_C ZapB
Other DBs
NCBI-GeneID: 109878675
NCBI-ProteinID: XP_020326474
Ensembl: ENSOKIG00005030578
LinkDB
Position
LG6:complement(81885227..81893155)
AA seq 456 aa
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSTAMGH
QHGNTGEVHALQKEVKALKETVEELTKRVSKLESKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctacgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aacgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctgtggaac
gtggcatgtggagaggccatggtgaggatcgattcggtccaccctgacctaatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcattgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcaccggcttcagtcgc
atgagtgagagacaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcatc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacagatgaggct
ccctatgttcactacctgtccatgtacagtagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgtgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtatccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcaacagccatggggcat
cagcacggtaacactggggaggtacatgccttgcagaaggaggtgaaggctctgaaggaa
acagtagaggagcttaccaagcgcgtgagcaaactggagagcaagaattga

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