Oncorhynchus kisutch (coho salmon): 109878693
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Entry
109878693 CDS
T09179
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109878693
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109878693
Membrane trafficking [BR:
oki04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109878693
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109878693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
T1-F
Myosin_tail_1
DUF7491
FKBP15
TolA_bind_tri
TPR_MLP1_2
ANG-1
BLOC1_2
CENP-F_leu_zip
Fib_alpha
PMD1-like
SPC25_N
T2SSF
DUF4515
CLIP1
CCDC89
LemA
Motif
Other DBs
NCBI-GeneID:
109878693
NCBI-ProteinID:
XP_031690671
Ensembl:
ENSOKIG00005008782
LinkDB
All DBs
Position
LG10:complement(65957257..65966510)
Genome browser
AA seq
519 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSLHGTPRHLTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMAADVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERRIDALQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKVISESLGYCIYMYPHYCT
GTGRHTTIQINMHTARCCTMHTLTTHYKMPTFTLSCLSFCCYAQFADLTDAATRNADALR
LAKQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDTVGHLEEEIQ
TLKEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDT
KFSPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcgtcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggcgtgcggctcagcagtctctcctccagccgcttctccctccatggg
accccccgccacctgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccagtaccgggagacgcgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacagtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggagacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccacgctcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaacttgaacgcctttagacaggatgtggatgag
gcatctctgaaccgtgtccagttggagaggaggatagacgcgctgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgagtccgtggcctcctcaaacattcaggagacggaggagtggtaccgc
tccaaggtcatatcagaaagcttgggctattgcatatacatgtacccacattactgtaca
ggcacagggagacacactaccatacagataaacatgcatacagccaggtgttgcacaatg
cacacattgacaacacactataagatgccgacttttacactgtcctgtctctccttttgt
tgttatgcacagtttgccgacttgaccgacgcagctactcggaatgcagacgccttgcga
ttggccaaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtg
gaggcgctccgtggaacaaacgagtctctggagcagcagctgcgtgagatggaggaccgt
ttctccgtggagacggctggttaccaggatacggtgggtcatctggaggaggagatccag
actctgaaggaggggatggccagacacctgcaggagtaccaggatctgctcaacgtcaaa
ctggccctggacatagagatcgctacctacaggaagctgctggagggagaggagagcagg
atcactgttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacact
aagttctctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactaga
gatggggagatcattaaggagtctacggctgagaggaaggagattcctgacagtccttaa
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