Oncorhynchus kisutch (coho salmon): 109878704
Help
Entry
109878704 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109878704
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109878704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109878704
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109878704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
PRP38_assoc
SET_assoc
Motif
Other DBs
NCBI-GeneID:
109878704
NCBI-ProteinID:
XP_020326498
Ensembl:
ENSOKIG00005031254
LinkDB
All DBs
Position
LG12:complement(8747947..8761677)
Genome browser
AA seq
327 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGGGGGGGGGGGGGRFPDRYGRGSQDS
RSRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSD
LKNAVEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRNRSPSRSRTPRRSRSH
SPKRDYNRSRSRSHSGSPAPRGGAGGAAPGSPPPRAKETSSTSSKRPSKPSKSASPHSPP
PAQRAPSRSPSRSRSRGSRSPSTDSRH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgccgcatatttgtgggccggttgaacccgtccgccagagagaaggacgtg
gagagattctttaaaggatacggccgcatccgagacatcgacctcaagaggggctttggt
tttgtggagtttgatgatcccagggatgctgaggatgccgtttatgagctggacggcaag
gagctctgtaacgagagggtaaccattgagcacgcccgagtgcgcctgcgtggtggccga
ggacgcggtggggacagaggaggaggaggtggtggtggaggaggaggaggagggggagga
ggaggaggagggggtggtggccgcttcccagatcgctacggccgtggctcccaggatagt
cggagtaggaaccctcctccgatgcgtacggagaaccgtctcatcgtggagaacctgtca
tctcgcgtcagctggcaggacctgaaagatttcatgagacaggcgggggaagtcaccttt
gcagacgcccaccgccccaagctcaacgaaggggtggtcgagttcgcttcttacagcgac
ctgaaaaacgctgttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctg
atcgaggcagctaagaagaggggttccaggagtcgctcccgttcagagagctcctctcgt
tctcgttctcgcaaccgctctccgtcccgctccaggacaccccgtcgttccaggtcccac
tcccccaagagggactacaaccgctcccgttctcggtcccacagcggctccccggccccc
cgcggtggtgcaggtggagccgcccccggttccccaccgcccagggccaaggagacctcc
tccacttcctccaaacggccctccaagcccagcaagtctgcctctccccactctcctccc
cctgcacagcgtgcaccttccaggtctccttccaggtctaggtctcgtggctctcgttcc
ccgtccacagacagccgccactga
DBGET
integrated database retrieval system
