KEGG   Oncorhynchus kisutch (coho salmon): 109878713
Entry
109878713         CDS       T09179                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109878713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109878713
Spliceosome [BR:oki03041]
 Complex B
  Other components
   Prp19-related factors
    109878713
 Complex C
    109878713
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus zf-CCCH_2 RRM_occluded Nup35_RRM_2 zf-CCCH zf-CCCH_4 zf-CCCH_10 RRM_YTH1 RRM_3 zf-CCCH_PARP12 zf-C2H2_16
Other DBs
NCBI-GeneID: 109878713
NCBI-ProteinID: XP_020326506
Ensembl: ENSOKIG00005047159
UniProt: A0A8C7L6U0
LinkDB
Position
LG29:34687474..34696824
AA seq 430 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEACQTCSKIKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQN
MEREIGNSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKSITTLYVGGLG
DSITDSELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLNV
KWGRSQGEGGRRDGRGGKDGRGEGLTEMGLKLEPVPGLPGALPPPPVDEDTPTNYFNLGP
NSAPPVMNISLPPPPGVAMPPPPGFGPPMFHSMDPMGMPPPMGMRPPGHVHYPSQDPQRM
GAHASRHGGS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcgacgtctttaggagctaacacttacaatagacaaaattgggaagacgcggatttt
cccattctctgccagacatgtcttggagagaatccttatattcgaatgaccaaggagaag
tatggcaaggagtgcaagatatgtgccagaccattcactgtgttccgatggtgtcctggg
acccgcatgcgcttcaagaagacagaagcgtgccagacgtgcagcaagataaagaatgtc
tgtcagacctgcctgctggatctagagtatggcttgccaatacaggtccgagacactggt
ctgtcaatcaaggacgacgtgccaaaatcagatgtgaacaaggaatactacacacagaac
atggaaagagagatagggaactctgatggtacccggcccgtgggtctcctgggtaaggcc
cccagctctagtgacatgctgctgaagctagcccgcaccacaccttactacaagaggaac
agaccacatatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtcct
tacaggcatgagaagccaactgatccagacgatcccctggcagaccagaacattaaggac
cgttactatggtatcaacgaccctgtggctgacaagctgctgaagagagcctccaccatg
ccgagactggacactccagaggacaagtccatcactacactgtacgtgggggggctcgga
gactccatcacagactctgaactcaggaaccatttctaccagtttggggagatccgaacc
accaccattgttcagaggcagcagtgtgccttcatccagtttgccacccgtcaggctgca
gagttagctgctgagaaatccttcaacaagctcattatcaacggtcgcagactcaacgtg
aaatggggcaggtctcagggagaggggggaaggagggacgggagaggggggaaggacgga
aggggagaagggctgactgagatggggctgaagctggagccggtacctggactgcctgga
gcgctacctccaccgcctgtggatgaagacacccctaccaactacttcaacctgggcccc
aactcagctcctcctgtcatgaacatcagtctacccccaccccccggtgtggctatgccc
ccccctccaggctttgggccacccatgttccactccatggaccctatggggatgccccct
cccatgggcatgaggccccctggccatgtccactacccctcccaggatccacagcgcatg
ggtgcacacgccagccgtcacggaggctcctag

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