Oncorhynchus kisutch (coho salmon): 109878792
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Entry
109878792 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109878792
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109878792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109878792
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
109878792
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109878792
Multi subunit type E3
ERAD complex
109878792
LMBR1L-GP78-UBAC2 complex
109878792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109878792
NCBI-ProteinID:
XP_020326582
Ensembl:
ENSOKIG00005005211
LinkDB
All DBs
Position
LG3:complement(76465769..76477973)
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AA seq
632 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTEQGFGVPDMDEPLPSAPLVGDNR
GGLEHVTSDDVVGADTELATTVMWYLVTDSLFVWVLVNTAFCSLMLIAKMIQCMVFGPLR
VSEKQHLKDKFWNFIFYKFIFIFGVLNVQMVEEVVMWCLWFSALVFLHLMVQLCKDRFEY
LSFSPTTSMNSHVRVLTLLVSLLLGCCGLAVVCGLLGAAHGMHTLSFMAAECLLVTVRTG
HVIMRYTIHLWDLNHPGTWESKGSYVYYTDFIMELSMLSLDLMHHIHMLLFGNIWLSMAS
LVIFMQLRYLFHEVQRRIRRHKNYLRVINNMEARFAVATAEELVANNDDCAICWDTMQTA
RKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNISGDGGPARGQQQGAGLPLDNNLGPGGP
AADARPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILAIAQQANNSQLNTMAHQIQE
MFPQVPYHLVLQDLQLTRSVEVTTDNILEGLIVVPFPALVAERSPVQVNPGPEEGAGASG
GVDTASRELNSLEVRGSRFSKSAEERQKMLLQRKDELLQQARRRYLRKSPEDEEDLPTLE
EDAPVSDVTMLRRRTMAAAAERRMQSQPDPAP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctattcctggagaggtttccctggcccagtctgcagacctacacagcgctg
agtgtggctctgctggctggaagcatcttcagcgcctacactactgtgacagaacagggg
ttcggggttccagatatggacgagcctctaccatctgcacccttagtaggggataataga
ggcggcctagaacatgtgactagcgatgatgttgtgggtgcagatacagaattggcgacc
actgttatgtggtacctggtcactgacagtctctttgtatgggtgttggtgaatacagct
ttctgttccctgatgttaattgctaagatgatccagtgcatggtttttgggccccttcga
gtcagtgagaagcagcaccttaaggacaagttctggaacttcatcttctataagttcatc
tttatcttcggggtgctgaacgttcagatggtggaggaggtggtcatgtggtgtctgtgg
ttctctgccctggtcttcctccacctcatggtccagctgtgcaaggaccgctttgaatac
ctgtccttctcccccactacttctatgaacagccatgtgcgtgtccttaccctactggtg
tccctgctgctgggctgctgtggtctggctgtggtctgtggtctgctgggcgctgcccat
ggcatgcacaccctctccttcatggctgccgagtgcctgctggttactgtgcggactgga
catgtcatcatgaggtacaccattcacctgtgggatctgaaccacccaggcacctgggag
agtaagggttcctacgtctactacactgacttcatcatggagctgtctatgctgtccctg
gaccttatgcaccacattcacatgctgctctttggtaatatctggctgtccatggccagt
ctggtgatcttcatgcagctgaggtatctgttccatgaggtgcagcgccgcatccgacgc
cacaagaactacctccgtgtcatcaacaacatggaggccaggtttgcagtggccacagct
gaggaactggtagccaacaatgatgactgtgccatctgctgggacaccatgcagacagca
cgtaaactgccctgcggacacctcttccacaattcctgcctgcggtcgtggctggagcag
gacacgtcgtgtccaacatgtaggatgtccctgaacatcagtggtgatggaggtccggcc
agaggccagcagcagggggctggcctcccactggacaacaacctgggccctgggggcccc
gctgcagacgccagaccacacctcaaccaacacaatcacttcttccactttgatggctcc
cgcatcgccagctggctgcctagtttctcagtagaggtgatgcacacaactaacatcctg
gctatcgctcagcaggccaacaactctcagctcaacaccatggcccatcagatccaggag
atgtttcctcaggttccctaccacttggtgctgcaggacctgcagttgacccgctctgtg
gaggtcaccaccgacaacatcctggagggactcatcgtggtgcccttccctgctctggtg
gctgagcgttcccccgtgcaggtgaacccaggcccagaggagggggcaggagccagtggg
ggggtggatactgcttccagagagctgaacagcctggaggtcagagggagccgtttctcc
aagtctgcagaggagagacagaagatgctgctacagaggaaggatgagctgctgcaacag
gcacgcaggagatacttgagaaagagcccagaggacgaggaggacctgcccactctggag
gaagacgcccctgtctcagacgtgaccatgctgagacgcaggaccatggcagcagctgca
gagagacgcatgcagagccaaccagaccctgctccctga
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