Oncorhynchus kisutch (coho salmon): 109879111
Help
Entry
109879111 CDS
T09179
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109879111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109879111
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109879111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
109879111
NCBI-ProteinID:
XP_031653025
LinkDB
All DBs
Position
LG19:13624303..13677635
Genome browser
AA seq
607 aa
AA seq
DB search
MNMTQQDTEGVTMDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQ
ERMRGMGGEEPSDSVVMTNSHSVTETVSSSSVTSSGGGDDDEQALLERMAKREERRQKRM
MEALEREKDQNPGNAGNHGSGENSVDERSVGRRGRYQDNEEEVEEQNCRKEEEEEEGKAA
PEEEEAEQGEEEEEEEEVVEEEKPRRSYMREQESIDEKTRNEEDTGEQAVVLNEVKESVN
SEAEVEEDAEISDKVEEPDQLEVEGTTVTPNNETEEDCDIPTIQNGLDVVNEKQNGGLHE
ETPPKHKKTERTLSRGSVRSPEAGAEEEQDDAANLEAERKLEELKRRRGDAESEEFERMR
RKQQEAEQELEELKKKREERRKIIEEEERQKKQEEAEKKDREEEEKRRMKEEIERRRAEA
AEKRQQMGVETVDGEAKPFKCFSPRGSSLKIGERAEFLNKSAQKSTVKTSHSPVVSKIDN
RLEQYTSVAQNKDMRSPRSGAVDLPMVTDGIRNIKTMWEKGNVFNSPGGGGGTYKEAAGM
KIGVAGRINDWLNKTPESKTPGGRPADLKPGDVTNKRSLWENKGSSPAKVTGRGENKSVA
NAGMGHE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgacccagcaggatacagagggcgtaaccatggacgacgactttgagcggcgc
agagagctcaggaggcagaagagggaggagatgcgcctggaggctgaacggatggccttc
cagggtagtaatgaggatgaggaggaggctgcaagggagcgtagacgcagggcacgtcag
gagaggatgagagggatgggaggcgaggagcccagtgacagcgtggtgatgaccaacagc
cacagtgtgaccgagacggtgtcctcctcctctgtgacctcctcgggtggaggagacgat
gatgagcaggccctgctggagcgcatggccaaacgagaggagcgcaggcagaaaaggatg
atggaagctctggagcgagagaaggatcagaaccccggcaatgccggtaaccacggcagc
ggggagaatagtgtggatgagaggtccgtcggccgcaggggccgttaccaagacaacgaa
gaagaggtggaagagcagaactgccgaaaggaggaggaggaggaggaggggaaggctgct
ccggaggaggaagaggctgagcagggagaggaagaagaagaggaggaagaggtggtggag
gaggagaaaccgagacgatcctatatgagagaacaggaatccattgacgagaaaactaga
aacgaggaagatacaggagaacaagcggtggttttaaatgaggttaaggaatcagtcaac
tcagaggcagaggttgaagaagatgctgaaataagtgataaggtagaggaaccagatcag
ttagaggtagagggcacgacagtgacaccgaacaatgagactgaggaagactgtgacata
ccaacaatccaaaacggcttggatgtggtgaatgaaaagcagaatggaggtctgcacgag
gagactcctccaaaacacaaaaaaacagaaaggaccctgagccgcggcagcgtgcgctcc
ccggaggcgggggcggaggaggagcaggacgacgcggcgaacctggaagcggagcgtaag
ctggaggagctgaaacggcgccgtggcgatgcggagagcgaggagttcgagaggatgaga
cggaagcagcaggaggctgagcaggagctggaggagctgaagaagaagagggaggagagg
aggaagatcatagaagaggaggagagacagaagaaacaggaggaggccgagaagaaggac
agagaggaggaggagaagaggaggatgaaggaggagattgagaggaggagggcggaggcg
gccgagaagagacagcagatgggggtggagactgtcgacggagaggccaaacccttcaaa
tgcttcagccccagaggatcctccctcaagattggtgaaagggcagagtttctgaacaag
tcggcacagaaaagcacggtgaagacgtctcactctcctgtcgtctctaagattgacaac
agactggagcagtacacctctgttgcgcagaacaaggatatgcggtccccacgctccggt
gccgtggacctgccaatggtgacagatgggatacgtaacatcaagaccatgtgggagaaa
ggcaacgtgttcaactcgcccgggggcggcgggggcacgtacaaggaagcagctgggatg
aagataggtgtggcgggccgcatcaacgactggctgaataaaacccccgagagcaaaacg
ccgggaggaaggcccgcggatctgaagccaggagatgtgactaacaagagaagtctgtgg
gaaaacaagggatcctccccagccaaggtgactggtagaggggagaataaatctgttgcc
aatgcaggtatgggacacgaatga
DBGET
integrated database retrieval system
