Oncorhynchus kisutch (coho salmon): 109879127
Help
Entry
109879127 CDS
T09179
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04217
Necroptosis
oki04622
RIG-I-like receptor signaling pathway
oki04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109879127
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109879127
04625 C-type lectin receptor signaling pathway
109879127
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109879127
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109879127
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109879127
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C67
109879127
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109879127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
109879127
NCBI-ProteinID:
XP_031687079
Ensembl:
ENSOKIG00005018538
LinkDB
All DBs
Position
LG8:74772916..74801535
Genome browser
AA seq
962 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSIRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVTLVEEEMDFHQLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNEATPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSPTPPSPQPSSPPSSRGGGGVPGLEVGS
LVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLE
LDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHR
HGKLSIPKELQEGVWRQGSYPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADR
DGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSL
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccctgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaagggcaagaggagcatacgcatcctggaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagagac
attgactgtggctccaaggtgcgcgtgcagctgcgttcgggtgatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaagatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcaccctggtggag
gaggagatggatttccatcagctggagatcaactccagggtcctggtccagaccagagag
gggccggagagaggaaccatcatcttctgtgaccttctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagagtactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagagttgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtcggggaggaccct
gccaagtccctcacagacacgccccctgacttcaatgaagccacacctcctaccagggcc
ccgccctctgcttccttgtccaatgacaacaagttccattccctgcccttcagcctgagc
cgtaagacggggcccaatggcagcatgagccatggacccctctccctctccgtgcagtca
gtgatgggagagcagatgcagatgccagagcccccgtcccctacccctccctctccgcag
ccctcctcacctcccagctctcgcgggggtgggggtgtgcctggtctggaggtggggtcc
ctggtggaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtggggctgccc
ccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtaca
gacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctgtttgtg
aagctgaaatgctgccggcctgactcccgtttcccctccctacaccactcctccaacccc
atagagagatgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaac
actcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatc
cagggacactacaactcctgctacctggactccacactcttctgcctgttttccttcagc
tcagtcctggacacagttctgctgaggccgaggtccaagactgacgtagagtattaccga
gagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtg
tgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcaggg
ttcacgtctgaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattg
agggtggaccccttactcaagctgaggtcggcaggtcagaaggttcaggactgctacttc
taccagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctccta
gagtggtccttcatcaacagtgacctcaagtttgctgaggctccttcctgccttatcatc
cagatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactggag
ttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctg
gctctgtatgaatgcagggagtgctacgaggacggtgacatcactgctgggaagataaaa
cagttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgc
cacggcaagttgtccatccccaaggaactgcaggagggtgtgtggcggcagggtagctac
cctcgtcagcggatggagctgttcgccgtgctctgcatagagaccagtcactacgtggcc
ttcgtcaagtacggccaccaagactctgcatggctcttcttcgacagtatggccgaccgc
gacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcc
tatctgaagatgacccctgaggagctgcacgccctggaccccaagagcatccagggccag
gcccgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctg
tacaagtag
DBGET
integrated database retrieval system
