Oncorhynchus kisutch (coho salmon): 109879147
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Entry
109879147 CDS
T09179
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
oki04261
Adrenergic signaling in cardiomyocytes
oki04382
Cornified envelope formation
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109879147
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109879147
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109879147
09158 Development and regeneration
04382 Cornified envelope formation
109879147
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109879147
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109879147
03036 Chromosome and associated proteins [BR:
oki03036
]
109879147
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109879147
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109879147
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109879147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
109879147
NCBI-ProteinID:
XP_020326932
Ensembl:
ENSOKIG00005006785
UniProt:
A0A8C7DMA4
LinkDB
All DBs
Position
LG3:complement(26652276..26666388)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEL
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFQPMDLMVEASPRRVFANAHTYH
INSISVNSDCETYLSADDLRINLWNLEITDRSFNIVDIKPVNMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDQHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY
MMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYRQDVTLEASRESSKPRSVLKPRKVCTGGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDKL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggcggcggaggcaatgatgtgcagtggtgtttctctcaagtcaaagga
gcgattgatgacgatgtggctgaagctgacatcatatccactgtggaattcaatcactct
ggggagctactagccactggggacaaggggggccgcgttgtgatctttcagcaggagcta
gagagcaagaaccagccacagtgccgtggggagtacaatgtttacagcaccttccagagc
cacgagcccgagttcgactacctgaagagccttgagatcgaggagaagatcaacaagatc
cggtggctgcctcagaagaacgctgcacagttcctcttgtccacaaatgataaaactata
aagctgtggaaaatcagtgaacgggacaagcgaccagaggggtacaacctcaaggaagag
gatgggcgctacagagaccccactactgtcacaacactacgggtcccagtgtttcagccg
atggacctgatggttgaggccagccccaggcgagtgtttgctaatgcacacacctaccac
atcaactccatctcggtcaacagtgactgtgagacctacttgtctgctgatgaccttcgc
atcaatctctggaacctagagatcactgaccgcagctttaacattgtggacatcaagcca
gtcaacatggaggagctgacagaggtgattacagcagcagagttccatccaaaccagtgc
aacacatttgtctacagtagcagcaagggcaccatccgcctctgtgacatgagagcatca
gctctctgtgaccagcactccaaactgtttgaagagcctgaagatccaagcaatcgttca
ttcttctctgagattatctcttccatctctgatgtcaagttcagccacagtgggcgctac
atgatgacccgggactacctgtccgtcaaaatctgggacctcaacatggagtcccgtcca
gtagagacttatcaggtccatgaatacctcaggagtaaactgtgctcactctatgagaac
gactgcatctttgataagtttgagtgctgctggaatggaaacgacagtgttgtgatgacg
ggctcatacaacaacttcttcaggatgtttgaccgaggctaccggcaggatgtgaccctg
gaggcgtctcgggaaagcagtaagcctcgttctgtgctcaagccccgcaaggtgtgcaca
ggtgggaagcgcaagaaggacgagatcagtgtagacagcctggactttaacaagaagatc
ctccacacggcctggcaccctcaggacaacatcatcgccgtggccactactaacaacctc
tatatatttcaggacaaactgtaa
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