Oncorhynchus kisutch (coho salmon): 109879240
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Entry
109879240 CDS
T09179
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
oki04210
Apoptosis
oki04217
Necroptosis
oki04218
Cellular senescence
oki04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109879240
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109879240
04217 Necroptosis
109879240
04218 Cellular senescence
109879240
09144 Cellular community - eukaryotes
04510 Focal adhesion
109879240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109879240
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
109879240
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C2: calpain family
109879240
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Linocin_M18
Motif
Other DBs
NCBI-GeneID:
109879240
NCBI-ProteinID:
XP_031661005
Ensembl:
ENSOKIG00005050240
LinkDB
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Position
LG25:45561952..45609402
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AA seq
763 aa
AA seq
DB search
MYILLRGKKLALTCSQEADRPRLKNQGRRRNLDFSTSETHPNSFHCVDAVSHPTRQRRRK
RTCTMAGVASTLAKKRALAAGFGTNANASKYLNQDFESLRSECLSRGSLFTDSTFPAEPA
SLGFNELGPRSSKTRGVQWKRPGELVSSPEFIVGGASRTDICQGGLGDCWLLAAIASLTL
NEDVMARVVPAGQGFGRGEYAGIFHFQFWQFGEWVDVVIDDRLPAKDGELLFVHSAEGSE
FWSALLEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLKKAPSNLFQIIRKALASG
ALLGCSIDITSQADSEAITNQKLVKGHAYSLTGAIEVNYRGRKEKLVRVRNPWGTVEWTG
AWSDNSSEWNSVDVSERDNVKADDGEFWMSFSDFTRHYHRLELCTLTPDTLTTDDVKHWS
VSNYDGAWRKGSTAGGCRNNPYTFWMNPQFKIKLEEEDDDPGDDEVGCSFVVGLIQKNRR
RMRKAGEDMHTIGFAIYEVPEQFHGQREVHLDKNYFLSHAQTARSETFINLREVSTRFKL
PPGEYLIVPSTFEANLNGDFCLRVFSEKQAETLPCDDPVKAELEDDTVPEGEVDAGFRGL
FTKLAGDDMEISASELRSIFNKIVAKRTDIKTDGFSLDTARIMVNLMDDSGNGKLGLGEF
ATLWKKIQKYLSIYKSNDMDGSGCMSTPEMRMALNKAGFSLNNTLHQVLAARYGEADMTI
DFDNFVACVMRLEMMFKVFKKLDMDDTGFIELDFFQWLSFSMI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtacatattgttgaggggaaaaaaactcgcactgacttgcagtcaagaggcagacaga
ccacgcctgaaaaaccaggggcgtagaaggaatttagacttttccaccagtgaaacacat
cccaactcttttcactgtgtcgacgcagtcagccacccgacccgacagaggagaagaaaa
aggacttgcacaatggctggggtggcatcaacgttggccaagaagagggctttggccgca
ggatttggcactaatgccaatgcgtcgaagtacctaaaccaagacttcgagtctctcagg
agcgagtgtctgagtagaggttcacttttcacggattccacttttccagccgaacctgcg
tccttgggattcaatgagctcggaccgagatcttccaaaaccagaggtgtgcaatggaaa
cgacctggggagctggtgtccagcccagagttcattgttggtggagcctcgagaaccgac
atctgccaaggcggcttgggtgactgctggctcctggcggccatcgcctctctgaccctg
aatgaagatgtgatggcccgggttgttcctgcaggacaaggctttggacgtggcgagtac
gctgggatctttcacttccagttctggcagtttggtgagtgggtggacgtggtgattgac
gaccggctgccggcgaaggatggagagctgctgtttgttcactcagccgagggctctgag
ttctggagcgccctgctggaaaaggcctacgccaaggtgaatggatgctatgaggctctt
tcagggggctccaccactgagggctttgaggactttacaggagggatagcagagaactat
gacctgaagaaggctccctccaacctgttccagattatcaggaaagccctggcctctgga
gctctgctgggctgctccatcgatatcaccagccaggcagactcggaggccatcaccaat
cagaagctggtgaaaggacacgcctactctctgaccggggctatcgaggtgaactaccgt
ggccgcaaggagaagctggtcagagtgcgtaacccctggggaacagtggagtggactggg
gcctggagtgacaactcctctgagtggaacagcgtggatgtttctgagcgggacaacgtg
aaggcagacgatggagagttctggatgtccttctctgacttcacgaggcactaccatcgt
ctggagctctgcactctgacccctgacacactgaccactgatgacgttaaacactggagc
gtgtctaactacgatggggcctggaggaaaggatcgaccgcaggaggatgcaggaacaac
ccctacacgttctggatgaatccccagttcaagatcaagctggaggaagaggatgacgac
ccgggggatgatgaggtgggctgtagcttcgtcgtgggactcatccaaaagaacagaaga
cggatgaggaaagcaggagaggacatgcacaccatcggattcgccatctatgaggttcca
gaacagttccacggccagcgggaggtccacctggataagaactacttcctgtctcacgcc
cagacggcccgttcggagaccttcatcaacctgagagaggtcagcacccgcttcaaactg
cccccaggagaatatctcatcgtaccctccaccttcgaggccaacctgaacggggacttc
tgcctacgagtgttctccgagaaacaggccgagacgctgccctgtgacgacccggttaag
gcagaactagaggatgatacagtacccgagggggaggttgatgctggcttcaggggcctg
ttcactaagctagctggagatgatatggagatttcagcatctgagctcaggagtattttc
aacaaaatcgttgctaagcgaacggacataaagacggacggcttcagcctggacacagcc
agaatcatggtcaacctcatggacgacagtggtaacggcaaactggggctgggagaattt
gcaacactgtggaagaagattcagaaatacctgtccatctataagagcaatgacatggat
gggtctggctgtatgagcacaccagagatgaggatggccttgaacaaagcaggtttcagc
ctgaacaacactctccaccaggttttggcagctcggtatggagaggccgacatgaccatt
gactttgataacttcgtggcttgcgtcatgcgcctggagatgatgttcaaagtcttcaag
aagcttgacatggatgacaccggtttcattgaattggatttcttccagtggttgtcattt
tccatgatctag
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