Oncorhynchus kisutch (coho salmon): 109879254
Help
Entry
109879254 CDS
T09179
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109879254
04517 IgSF CAM signaling
109879254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109879254
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
NGL family
109879254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
LRR_9
ig
V-set
Ig_2
Ig_MYOM1
Ig_6
VEGFR1-3_N_Ig-like
LRRNT
LRR_NXF2
Syndecan
Phycodna_minor_capsid
Motif
Other DBs
NCBI-GeneID:
109879254
NCBI-ProteinID:
XP_031668396
Ensembl:
ENSOKIG00005031076
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MLITMISSLQRQTMRDPRLRGARSYPLFVLLLALQILAVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFQDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIGPGSF
AGLANLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPASYRGRYIGELEHSYFQCDVPVIVEP
PADRNVTEGMAAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLAVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETVDDSQTPALPPIGWVS
SSTTRGPPVQTRTTERTYTVSVLDLDGEGDRGLEEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQNHQQDPDGPASSMEVITVEEELAGVAAMETHLHLPPLEHYNHYNTYRSTYHHS
HTQEPLLIQASSKDNVQETQI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacaatgatctcctccctccagcgccagacaatgagagatcctaggctgagg
ggggctcggtcctatcccctcttcgtgctactgttggccctccagatcctggcggtggcc
ggcctggtgcgtgcccagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgccggagcctgcgcgatgtccccgacggcatctcaaccaacacacgt
tacctgaatcttcaggacaacctcatccaggtgatcaaggtggacagcttcaagcatcta
cggcacctggaaatcctgcagcttagcaagaaccacattcgcaacattgagattggcgcc
ttcaacggcctggccagtctcaacaccctggagctgttcgacaaccgtctcaccaccatc
cccaatggggcgttcgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
attgagagcatcccgtcgtacgccttcaaccgggtcccctcgctgcgaagactggacctt
ggagagctcaagcggctctcctacatctcagatggagccttccaggacctcagcaacctg
cgctacctgaacctgggcatgtgcaacctcaaggagatccccaacatcctacccttggtc
aggctggaggagctagagatgtcagggaaccagatctctgtcatagggcctggctctttc
gcagggctggcgaacttgcagaagttgtggatgatgcacgctcagatccagaccatcgag
aggaactcctttgacgacctccagtccctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgacctgttcacccccctgcaccgcctggagagagtccatctgcac
cataacccctggaactgtaactgtgacatcctgtggcttagctggtggctgaaggagaca
gtgcctgccaacaccagctgctgtgcccgctgccacaccccagccagctacaggggtcgc
tacatcggcgagctagagcacagctacttccagtgcgacgtgcctgtcatcgtggagccg
ccggcggaccgtaacgtcacagagggcatggcggctgagctcaagtgcagaacgagctcg
ttgacctcggtcagctggctcacccccaacgggtctctggtgacccacggggcgtacaag
gtgcgtctggccgtcctcaacgacgggacgttgaacttcaccaccgtcaccatgcaggac
acggggacttacacctgcatggtgagcaacacggcgggcaacatctctgcctctgccgtg
ctcaacgtcacctcggtggagaacagcggcgtcacctacttcaccacagtcaccgtggag
accacagagacagtcgacgacagccagactcctgctcttccaccgattggctgggtatca
tcctcgaccaccagggggcctccagtccagaccaggaccacagagcggacctacaccgtc
tctgttctggacctggacggggagggggaccgcggcttggaggaggtgatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacactcatggcggccgtcttgctggtcatt
ttctacaagatgaggaagcagaaccaccagcaggaccccgatggccccgcctcctccatg
gaggtcatcacagtggaggaggagcttgccggtgtcgctgccatggagacccacttacac
ctgcccccgttggagcattacaaccattacaacacttacaggagcacctaccaccactcc
cacacacaggaacctttactgattcaagccagctcaaaagacaatgtgcaagagacccaa
atttga
DBGET
integrated database retrieval system
