Oncorhynchus kisutch (coho salmon): 109879294
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Entry
109879294 CDS
T09179
Name
(RefSeq) ubiquitin-like protein ATG12
KO
K08336
ubiquitin-like protein ATG12
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04068
FoxO signaling pathway
oki04136
Autophagy - other
oki04140
Autophagy - animal
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109879294
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109879294
04136 Autophagy - other
109879294
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109879294
04622 RIG-I-like receptor signaling pathway
109879294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109879294
04121 Ubiquitin system [BR:
oki04121
]
109879294
03029 Mitochondrial biogenesis [BR:
oki03029
]
109879294
Membrane trafficking [BR:
oki04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109879294
Ubiquitin system [BR:
oki04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
109879294
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109879294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
109879294
NCBI-ProteinID:
XP_020327064
Ensembl:
ENSOKIG00005017237
UniProt:
A0A8C7GC88
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All DBs
Position
LG2:complement(5541342..5545286)
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AA seq
140 aa
AA seq
DB search
MQRFPHNECVSESSALGLLRMSDKAESPTETQKDEPSTPQQPTEDSGMADDKKKIDVLLK
AVGDTPIMKTKKWSVEKGRTVQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLF
QCFGSDGKLVLHYCKSQAWG
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttttccccataacgagtgcgtgtcagaatcaagtgcactaggactgctgagg
atgtctgacaaggcagagtctcccacagaaacgcaaaaagatgagccttcaaccccacaa
cagcctacggaagactcggggatggcagacgataagaaaaaaattgacgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcggtagagaaagggaggaca
gtgcaatcactctctcaattcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
caatgttttggcagcgatgggaagcttgttctacattactgtaaatctcaagcctggggt
taa
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