Oncorhynchus kisutch (coho salmon): 109879392
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Entry
109879392 CDS
T09179
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109879392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109879392
Membrane trafficking [BR:
oki04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
109879392
Endosome - Golgi transport
Arf GTPase associated proteins
109879392
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109879392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_3
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
109879392
NCBI-ProteinID:
XP_031647031
Ensembl:
ENSOKIG00005016555
LinkDB
All DBs
Position
LG15:81280576..81403965
Genome browser
AA seq
1580 aa
AA seq
DB search
MSEEDGCVSVWEWLCVLHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTQPESEPDALHAHLAAEGDQREEERAVFTDRPSPVGSKRPVPAQRPVS
RGERPVPAQRPFPRGERPVPAQKPVPKERSVSREGERDGERPVPAQRPVPKERTKYRSVP
VETLDCVQTYPRPNTSPCPTTPHSSAQDSPLPPIPPRSTPNCPPLRFIPTSPKNSPTAPK
PRSEHNNLNTPITVPPPSLTTNPLTLPSPRPCPAPLAIYPPARHSQQVWEGGRKPSPGSP
SSSSSSSFEKYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHRPPVLPSRTTPTQSD
APVDEPHTDRTPPPPPRTKVLNTPVDTQPALPMRRIPQPRPEIRSGDSSDDYEDPDQVFP
KPQAVNLAEDPDQIYSKPQAVNLAEDPDQIYSKLQSVNMADRDVFLPVPGWGKGRYNSLC
SDDELLDDDNEPISSHRSSWQDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPEPCTVLKIG
WLDKNPTQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVAT
ANRNFLFKAESDSERNEWVAVLQNFTRGHQEGSREMTSLVPPSFLTPGSPLTPEQQGYLE
LRGLRSKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKVTDRRSFDLTTPYRIFS
FLADSEQHKEQWVEAMRDAIGEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLCVV
VCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERLNRFWAANIPPSEALS
PTSCSEDRRRFISSKYRQGKYRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCGADV
NCSTGQTDCPSPLSLALAHNQKLQAQFLSHNLNSELPHSEVTGDMEPQHYSPQHPVIHNG
FLFKTASMVRPITERKAREEFSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLSVNT
PERHGYDHTFELYSDSERLYLFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERIGRL
KYKDGLNLQSPRVGWFALVGSSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVERGR
TLYIEGERKLDFQGWCVGIQKAAGSAGDSLSQQQLTEADIPVIVDRCIDYITQCGLTSEG
IYRKSGGNSRVAALCEAFRRDARNVRLKEEEHQVDDVSNTLKRFFRESGEGLFTKQAASA
WLSTPVIPEESKKISQYQLLLSRLPKVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVF
GPTLFQSDGKDFTAGRVVEELIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNSSVP
ASGSAGDFICTVYLEEKKETAEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVS
QKEETERPLHHLERVLPILHSLGTDSHLLVKKNLAMEAILVYLASKVDVSKHGMVKFREE
RSILGLGLNTGSFHDRYFILNTVSLRMYKEVRSNRSEREWQVKNLRVYLGIKKKLRPPTC
WGLTVIYKSEKQEKPEKQQW
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggacgggtgtgtgtcggtgtgggagtggctgtgtgtgctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgctgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacagccagagagtgagcccgac
gctctacacgcacacctggctgcagagggagaccagagagaggaagagagagcagtgttc
acagacagacccagccctgtggggagtaagagaccagtccctgcacagagaccagtgtcc
agaggagagagaccagtccctgcacagagaccattccctagaggagagagaccagtccct
gcacagaaaccagtccctaaggagagatcagtgtccagggaaggagagagggatggagag
agaccagtccctgcacagagaccagtccctaaggagagaactaagtaccgctctgtccct
gtggagacattggactgtgtccagacttaccctcgtcccaacactagcccctgccctacc
accccccattctagtgcccaggactcccctttaccccccatcccacctcgcagcactcca
aactgccccccactacgcttcatccccacctccccgaaaaactctcccacggcacccaaa
cccagatctgaacataacaacttaaacaccccaatcactgtacctcctcctagccttacc
accaatcccctcaccttaccctcccccaggccctgtcctgcacctctggctatctaccca
ccagccagacactcccagcaggtgtgggagggaggaagaaagccctcccctggttccccc
tcatcctcctcttcctcctcatttgaaaaatatgaccagtcatcatctgatcaaggcgtg
cctcccctcccccctaaagtctatgtggtgggggcgggccctaaagagcctcatagtcct
gctccaatcccacatcgacctcctgtcttgccctccagaaccacacccacacagagtgat
gctcccgtcgatgagccgcacacggaccgaactccaccacccccgcctcggaccaaggta
ctcaatacaccagtcgacacgcagcctgctctgcccatgagaaggatcccccagccacgg
cctgaaatcaggtcaggtgacagttcagatgactatgaagatccagaccaagtcttcccc
aagccccaggctgtgaacctggcagaagatccagaccaaatctactccaagccccaggct
gtgaacctggcagaagatccagaccaaatctactccaagctccagtctgtgaacatggca
gacagagatgtgttcctgccagtgccggggtgggggaagggacggtacaactctctctgc
agcgacgatgaactattggatgatgacaatgagccaatcagcagccatcggagctcatgg
caggactatggtctgagtacgctccagggtagtgtctacctgccggtcagaggcagggtc
cttgccccgccccctagagatggcccctcccctgaaccctgcactgttctaaagattggc
tggctggataagaacccaacccaggggtctctgtactaccagaggagatgggtgaagctg
gatgttgactacctgagatactttgacaacgacaaggaggtatactctaagaggatcata
ccaacggctgccattacgggggtgaccaacgtgggggagcagaagtttgaggtggccaca
gccaaccgaaactttctcttcaaagccgagagcgactctgagaggaatgagtgggtggca
gtgctgcagaacttcactagggggcaccaggaaggcagcagggagatgacctcattggtc
ccgccctcctttctgacccctggttcacccctgacccctgaacagcagggctacctggag
ctgaggggcctgcgctccaaactctacacagtcgtctccggagacaaggtcttcctctac
aagaacatggaggactaccgccttggcatcggtatcacgtctatcgacatgaatgtagga
aacgtgaaagtcactgaccgccgcagttttgatttgaccacaccctaccgcatcttcagt
tttctagcggattcggaacaacataaggagcagtgggtagaagcaatgcgtgatgcaatt
ggagaagctctgtccaatagcgaggtggctaatcaaatctgggcggagcctagcaacggt
tgctgtgccgactgtggcgccgccaaacctgagtgggctgccatcaacctgtgtgtggtg
gtctgcaaacgctgtgcaggagagcatcggggtttgggccccagcatctctaaggtgcgc
agtctgaagatggacaggaaggtgtggacagaggagcttatacaggtgttcctgttgcta
ggaaacgagcgtctgaacaggttctgggcggcgaacatccctcccagcgaggcgctgagt
ccgaccagctgcagcgaagaccgccgacgattcatcagctccaaatacagacagggcaaa
taccgcaaatatcaccccctctacggcaaccagagagagctcaacaacgccctgtgtata
aacgtgcagtgcagtgatgtgctggaaacgttgtgtctggtgttctgtggagctgatgtg
aactgttctactggccagactgactgtccctcccccctctccctggcactcgcacacaac
cagaaactacaggcccagttcctctctcacaacctcaactcagagctgcctcattcggag
gtgactggggacatggagcctcaacactattcaccacagcacccagtcattcacaatggc
ttccttttcaagaccgcctccatggtccggcctattacggagcgcaaggccagggaggag
ttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactatgagagtgacaag
acctccacgcccaacggtgccctgaagtctacagagatagtctgtctgtctgtcaacaca
ccagagagacatggctatgaccatacgtttgagctgtactctgactcagagcgtctctat
ctgtttggaactgacgaccaagacagccacaaggagtgggtcaaatccatcaccaagatg
tttattccgtccaatgcagaggctctgttgagactgagctttgagcggattggccggctg
aagtacaaggacgggttgaacctacagagccctcgggttggctggtttgcgctggttggc
tcctccctccatgcctacctggaggacagtgaggaagaggaggagatacacctacgcaaa
ctacaggagctctcgatccagcaggagaatgaggtgctggttctggtggagagaggcagg
acactgtacatcgagggggagaggaagcttgacttccagggttggtgtgtgggcatccag
aaagcagcaggcagtgcaggagactctcttagtcagcagcaactaactgaggccgacatc
cctgttatagtggaccgctgcattgactatatcacacagtgcggtctgacgtctgagggt
atctaccgtaagagcggggggaacagtcgcgtggcggcgctgtgcgaggcgtttcggcgt
gatgcccgtaatgtgcgtctgaaggaggaggagcaccaggtggacgacgtgtctaacaca
ctgaaacgcttcttcagagagtctggagagggcctgttcaccaaacaagctgctagcgca
tggctcagcacacctgtgatcccagaggagagcaagaagatctctcagtaccagctgctg
ctgagccgcctgcccaaagtcaacaaggccacgctacgagccctggtcaaccacctctac
tgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggctatagtattt
ggcccaacactgttccagagcgacgggaaggacttcacagctggccgcgtcgtagaggaa
ctcatagagcactacactgacgtctttgaggtggatgagcagcagctgaaaaggcagctg
gatgagatcacggtcatcattaaagttagagagaagttgaacctcaactccagtgttcct
gcgtcggggtcagcaggtgacttcatctgtacagtgtacctggaggagaagaaggagact
gcagagcagcatgtcaagatccctggttctatgacggccgcagagctgacctgtgagatt
ctggaccggcggaagatccaggtcagagaaaaagactactggagctgctgggaggtcagc
cagaaggaggagaccgagcgtccgttgcatcatctggagcgtgtgttacccatcctacac
tctctgggtaccgactcccacctgctggtcaaaaagaacctggccatggaggccatactg
gtctacctggccagtaaagtggatgtgtccaagcacgggatggtgaagttccgggaggag
aggagcattctgggattgggactgaacaccggcagcttccacgaccgctacttcatccta
aacactgtctcactcaggatgtacaaggaagtgcggagtaatcgttcagagagggaatgg
caggtgaagaatctgagggtctatctaggcatcaagaagaaactacgaccacccacctgt
tggggtctgactgtgatctataaaagtgaaaaacaggagaagccagagaagcagcaatgg
tga
DBGET
integrated database retrieval system
