Oncorhynchus kisutch (coho salmon): 109879409
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Entry
109879409 CDS
T09179
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oki04054
]
109879409
Pattern recognition receptors [BR:
oki04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109879409
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_9
TIR_2
LRR_5
LRR_1
LRR_NXF1-5
LRR_LRWD1
BD_b_sandwich
Motif
Other DBs
NCBI-GeneID:
109879409
NCBI-ProteinID:
XP_020327177
Ensembl:
ENSOKIG00005013441
LinkDB
All DBs
Position
LG16:complement(45277059..45280782)
Genome browser
AA seq
969 aa
AA seq
DB search
MTLKIAMPGKQSGSTFSQLRLFLSFLMYCWGLADPACGYFLKNCTIRGNLSDNFNLKVLC
YNRNLEVMPINIPCKVSVLDVAMNNISKIGKLDFKGLSNLKILNMSINQISQVDDGSLRS
LKALRELNLAHNRLTTLSDHLFQGLASLSLLHLDNNLITTIGSSSFQLLSSLKTVNLTKN
NLHNMKEVQPIVQLPHLQELYIGSNRFTSFQSQEISNTSIELRLLDLSRNPLGVFRITTD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLRNVKSLNLSGIEMSLERMAMVLQTVNSSLVH
LRLYDISEERVKALIDFACNIPTLSLLRLHHNNISALSEEFLQSCKQVTEVDLENNNIIQ
LSEVSFRSMEQLSTLRLGHNRLSSVPDATRNISTLMLLDLSFNIIHKLGCSDFSNLTGLT
QLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILTLNDDFMSGLHKLEFLSMSYNKLSSI
SKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLQSNKITQIDIRNTVLTGLPH
LRTLDISCNYITYVNDDKLDPPPLSHLTSLENLLIFSQRHKGLCHLPINFLEGLKSLLSF
QAGSLNIKDLHPDTFIHTPRLWFLDISKNEFTALTPKLFHPTPSLNRLYLPKARLQSLDF
LIGANLSRVTFLQVRKNDITVVNETVLQSLPALTYLDMQDNPFTCGCSDAWFVQWMESNN
QTQVAGAGELTCNYPEDLKGNKLLDVELQFCTVDLGLYYYISTTCLVLLTLIASFAYHFL
KWEVIYGYYLFLAFLYDTKQRNKHKPHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWK
LCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISHRYLESEWCSREIQVASFRLFDEQKDV
LILVFLEEIPTHQLSPYHRMRKLVKKRTYLSWPRVGEHTAVFWQQLRLALETKDGPAEEN
PILSGVQAL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagatagccatgccaggaaaacaaagtgggtctacattctctcagctgaga
ctctttcttagtttcctgatgtattgctggggtctagctgatccagcatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacaactttaacttgaaagtactctgt
tataacaggaatcttgaagtcatgcctataaatattccttgtaaagtaagtgttttagat
gtggccatgaataatatttccaaaatcggaaagttggattttaaaggactgtcaaacctc
aaaattctaaacatgtccataaaccagatctctcaagtggatgatgggtctctcagatcc
ctaaaggcgcttcgagagctgaatctggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctggccagcctctccctgctacatctggacaacaacctcatcacaacc
atcgggtcctcatcctttcaacttctctccagtttgaagacagtgaatttaaccaagaac
aaccttcataatatgaaggaagttcagcccatcgtacaattaccacacttacaggagttg
tacattgggagcaacagattcacctctttccagtcacaggaaatatcaaacacttctata
gagctgaggctgttggatttatcccggaatccattgggagtcttcaggatcacgacagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtcctggacaggtcttttctgagaaacgtcaaaagtctcaacctgagcgggatt
gagatgtctttggagaggatggctatggtgctgcagacggtcaactcctcattagtccat
ctgagactgtatgacattagtgaagagagggtcaaggctctcattgattttgcctgcaat
atacccacacttagcttgctccgactgcatcataacaacataagtgctttgtctgaggaa
tttctgcagtcatgtaaacaagtgaccgaagtggacttagaaaataataatattattcag
ctgtcggaggtatcattcagatcaatggagcaactaagtactttgagactgggccacaac
aggctttcttccgtaccagatgccacaagaaatatatccacactaatgctcctggatctc
agcttcaatatcatccataaactgggctgctcagatttctccaatcttacaggactcaca
caactctttcttttccacaatcaaatctccaaccttccaggatgtgttttccaggatttg
aaagacttaaggatccttaaactgggatcaaacaaaatcctgaccttgaatgatgacttc
atgagtggtttgcacaaactagaatttttgtcgatgtcatacaataaactgagctcaatc
tctaaaggagactttaaaggcttagcatcactcaagaccctgcttttatttgacaatcag
attgctagtcttgaagatggagcctttgagggattggtgaatcttacagaacttagacta
cagtcaaataagatcactcaaatagacatcagaaatactgtgctcacgggacttccacac
ttaagaactcttgatatatcctgtaattacatcacatatgtaaatgatgataaattagac
cctccacccctctctcatctgacatctctggagaaccttttgatatttagtcagcgtcac
aagggactgtgtcatctaccaatcaactttcttgaaggtctgaaatctttattgtcattc
caggcagggagtcttaatattaaggacctgcacccagacacattcattcacacaccccgg
ttgtggttccttgatatcagtaagaatgagttcacagccctcactccaaagctgtttcac
ccaaccccaagtctcaacagactttatctgcccaaagcccgacttcagtccttagatttc
ctcataggagcaaacctcagtagagtcactttcttgcaggtgagaaagaatgacataaca
gtagtcaatgagacagtgttgcaatctctccctgccttgacatacctggacatgcaagat
aatcctttcacctgtggctgcagtgatgcttggtttgtccagtggatggagagcaacaac
caaacacaagttgctggcgcaggagaattgacctgcaactatcctgaagatctaaagggc
aacaagctgttggatgttgagcttcagttctgtacagtggacttaggactttactactac
atctcgaccacttgtctggtcctcctcaccctgatagcatcctttgcctaccacttcctg
aaatgggaggtcatttacggctattacctcttcctggcgttcctctatgacaccaagcaa
aggaataagcacaagcctcatggctgtcagtacgatgccttcatttcctacaatgcccac
gatgagccctgggtcctgagggagcttctgccagagctggagggagaacagggttggaag
ctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaacattatggac
ggcatctacggaagccgcaagaccatctgtgtcatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaaggacgtc
ctgattctggtgttcctggaggagatccctacccaccagctgtcaccctaccaccggatg
aggaagctagtgaagaaacgcacatacctgagctggcccagagttggggagcacaccgcg
gtcttctggcagcaactacggctggcattagagaccaaggacggccctgctgaggaaaat
cccatcctctctggggtgcaggctctgtga
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